Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC025754.2-201ENST00000606491 432 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 MIR6715A-201ENST00000615929 79 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 snoZ196.1-201ENST00000625269 89 ntBASIC2.8□□□□□ -1.96
CTDP1Q9Y5B0 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-312P-201ENST00000364629 107 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.272-201ENST00000364696 102 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.412-201ENST00000384001 104 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 SNORD14D-201ENST00000384390 87 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 SNORA8.3-201ENST00000384679 139 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 SNORA3.2-201ENST00000408221 125 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 TMSB4XP3-201ENST00000445144 114 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 RN7SL297P-201ENST00000483161 293 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 ATP5EP1-201ENST00000510257 156 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AC026436.1-201ENST00000510537 270 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 SNORD14A-201ENST00000606526 91 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 AC132825.6-201ENST00000638861 357 ntBASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.79□□□□□ -1.96
CTDP1Q9Y5B0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.23-201ENST00000362496 106 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.75-201ENST00000362927 97 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RNU4-10P-201ENST00000364383 140 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 SNORD31B-201ENST00000364977 69 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.357-201ENST00000365487 109 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 SNORA6-201ENST00000384033 151 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-975P-201ENST00000384296 105 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-381P-201ENST00000391259 108 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 MIR873-201ENST00000401120 77 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 AL355497.1-201ENST00000406262 551 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RN7SKP192-201ENST00000411291 327 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RNU6-57P-201ENST00000411348 103 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 AC090515.1-201ENST00000465295 476 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 YWHAEP4-201ENST00000505390 198 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RN7SKP164-201ENST00000516138 266 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 RNA5SP281-201ENST00000516504 135 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.802-201ENST00000614892 130 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 MIR6873-201ENST00000622788 63 ntBASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
CTDP1Q9Y5B0 Y_RNA.124-201ENST00000363339 93 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-1205P-201ENST00000363625 106 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-438P-201ENST00000365561 103 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 SNORD116-18-201ENST00000383961 92 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 SNORA20B-201ENST00000384220 132 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 MIR613-201ENST00000385248 95 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AL355796.1-201ENST00000406706 323 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 RNU2-63P-201ENST00000410792 194 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AL121890.1-201ENST00000435457 205 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 HSPE1P21-201ENST00000438283 308 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AC016717.1-201ENST00000448918 286 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 RNU7-141P-201ENST00000459304 62 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-965P-201ENST00000516721 96 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AC018630.3-201ENST00000542637 96 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AC004832.4-201ENST00000608952 331 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 AC046143.2-201ENST00000609789 160 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 MIR6895-201ENST00000613497 78 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 MIR1291-201ENST00000627649 87 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 MTND1P7-201ENST00000632801 297 ntBASIC2.77□□□□□ -1.97
CTDP1Q9Y5B0 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 SNORD114-7-201ENST00000362520 77 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 RNA5SP125-201ENST00000364843 120 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 MIR626-201ENST00000385032 94 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 SEPT7P4-201ENST00000437076 306 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 RPL23AP7-203ENST00000449021 469 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-221P-201ENST00000459541 99 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 CKS1BP2-201ENST00000497342 240 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 MIR5694-201ENST00000581190 76 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AC078899.2-201ENST00000595282 212 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 MIR5739-201ENST00000619803 80 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AC068700.1-201ENST00000565862 3754 ntBASIC2.76□□□□□ -1.97
CTDP1Q9Y5B0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 Y_RNA.24-201ENST00000362508 103 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-103P-201ENST00000363686 107 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-271P-201ENST00000363858 105 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 SNORA3A-201ENST00000364113 130 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-275P-201ENST00000364910 107 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNA5SP240-201ENST00000365355 128 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 AC010598.1-201ENST00000510378 103 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-948P-201ENST00000516374 107 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RNU6-1337P-201ENST00000516525 95 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 IGLV3-17-201ENST00000519099 244 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 AC027419.1-201ENST00000522976 328 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 MIR4744-201ENST00000581563 82 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 AC012640.5-201ENST00000623897 319 ntBASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.75□□□□□ -1.97
CTDP1Q9Y5B0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 AL159152.1-201ENST00000635019 2587 ntBASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
CTDP1Q9Y5B0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 191.1 ms