Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 AC004792.1-201ENST00000614523 137 ntBASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
R3HCC1Q9Y3T6 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 SNORA3A-201ENST00000364113 130 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.293-201ENST00000364908 93 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-376P-201ENST00000384731 106 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 HMGN2P39-201ENST00000398005 273 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 AC022559.1-201ENST00000520905 205 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 AC007229.1-201ENST00000590455 412 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 POLR3GP1-201ENST00000594073 261 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 Z83818.1-201ENST00000603584 150 ntBASIC2.87□□□□□ -1.95
R3HCC1Q9Y3T6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 RNU1-52P-201ENST00000384190 164 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.572-201ENST00000384757 98 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 MIR518A2-201ENST00000384966 87 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.793-201ENST00000411222 111 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 AC010154.1-201ENST00000425857 269 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 RPS4XP11-201ENST00000446897 772 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 AC107393.1-201ENST00000512403 346 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 RNU7-99P-201ENST00000516271 62 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 AL033523.1-201ENST00000605153 153 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 AL359075.3-201ENST00000613288 217 ntBASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
R3HCC1Q9Y3T6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-1205P-201ENST00000363625 106 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU4-13P-201ENST00000364019 141 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU11-3P-201ENST00000391111 133 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-918P-201ENST00000391219 106 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 SNORA36B-201ENST00000410438 131 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU2-52P-201ENST00000410680 190 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 PIGPP3-201ENST00000425307 415 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6-182P-201ENST00000516970 105 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 AC127455.1-201ENST00000565496 145 ntBASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
R3HCC1Q9Y3T6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 Y_RNA.111-201ENST00000363248 100 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 CST2P1-201ENST00000425770 87 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 HMGN2P3-201ENST00000433603 273 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 HMGN2P5-201ENST00000436882 273 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 AP002392.1-201ENST00000537692 208 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.84□□□□□ -1.95
R3HCC1Q9Y3T6 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 RNU6-1020P-201ENST00000363684 107 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 RNU1-51P-201ENST00000365345 176 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 COX6CP10-201ENST00000416832 224 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC091021.1-201ENST00000468051 388 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 RPL23AP54-201ENST00000495129 419 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 RNU1-142P-201ENST00000516682 145 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC021269.2-201ENST00000532318 330 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC091178.2-201ENST00000584401 117 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC005786.1-201ENST00000588553 154 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.83□□□□□ -1.96
R3HCC1Q9Y3T6 AC062016.1-201ENST00000355719 319 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 SNORA8-201ENST00000384574 139 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 MIR144-201ENST00000384886 86 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 RNA5SP323-201ENST00000391094 133 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 RNU6-383P-201ENST00000410864 94 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 RNA5SP270-201ENST00000411361 118 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 SUMO1P4-201ENST00000429430 302 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 TRBV12-1-201ENST00000479785 344 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 AL163195.1-201ENST00000496941 348 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 RNU7-116P-201ENST00000516940 62 ntBASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.82□□□□□ -1.96
R3HCC1Q9Y3T6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 snoU2_19.4-201ENST00000364329 80 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 MIR626-201ENST00000385032 94 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 RPS15AP28-201ENST00000435088 386 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 RNU7-120P-201ENST00000459334 63 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 RPS29P21-201ENST00000496272 170 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 IGLV3-17-201ENST00000519099 244 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 MIR5092-201ENST00000583139 88 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 AL929325.1-201ENST00000603096 117 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 AC098479.1-201ENST00000609225 154 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 FTX_2.1-201ENST00000618816 94 ntBASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
R3HCC1Q9Y3T6 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 599 ms