Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.203-201ENST00000364106 102 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 RNU6-136P-201ENST00000384663 107 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 RNA5SP21-201ENST00000410917 96 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 AC016909.1-201ENST00000415916 166 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 AL357134.1-201ENST00000445848 426 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 MIR6817-201ENST00000615588 66 ntBASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
RTCBQ9Y3I0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 U8.1-201ENST00000362843 134 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 RNU2-70P-201ENST00000410718 179 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 AL158147.1-201ENST00000443970 75 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 HMGN2P18-201ENST00000450680 270 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 RNU6-772P-201ENST00000516042 105 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 SNORD77.4-201ENST00000516158 81 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 SNORD59.2-201ENST00000516873 68 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.709-201ENST00000516952 92 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 MTND5P34-201ENST00000568888 325 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 RPL23AP91-201ENST00000569211 455 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 AC131055.1-201ENST00000584626 316 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 AC004832.5-201ENST00000608677 401 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 U6.95-201ENST00000636931 70 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 MIR7153-201ENST00000637758 57 ntBASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RTCBQ9Y3I0 RNU1-22P-201ENST00000363334 158 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 AC245102.2-201ENST00000448956 180 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 CYCTP-201ENST00000504253 315 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 MIR3121-201ENST00000579680 77 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 AC110079.1-202ENST00000635213 138 ntBASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RTCBQ9Y3I0 AC138915.1-201ENST00000565427 1685 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.280-201ENST00000364765 112 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 SNORA67.4-201ENST00000384688 142 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 RPL39P40-201ENST00000445481 146 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 RNU6-965P-201ENST00000516721 96 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 AC104027.1-201ENST00000521887 300 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 AC097639.2-201ENST00000603159 172 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 AC090115.4-201ENST00000609970 188 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 MIR1248-201ENST00000629190 106 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 AC103988.1-201ENST00000566382 2177 ntBASIC3.55□□□□□ -1.84
RTCBQ9Y3I0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.634-201ENST00000364811 113 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 SNORD18B-201ENST00000365659 72 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RNU1-101P-201ENST00000391171 127 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 SNORA26-201ENST00000391286 122 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 MICF-203ENST00000432679 129 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RPS4XP11-201ENST00000446897 772 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RN7SL633P-201ENST00000488974 297 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 AC097462.1-201ENST00000514125 324 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RNU6-237P-201ENST00000515985 71 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RNA5SP148-201ENST00000516527 94 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 RNU7-172P-201ENST00000517125 64 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 MIR4438-201ENST00000585271 93 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 AC064859.1-201ENST00000624741 174 ntBASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
RTCBQ9Y3I0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.91-201ENST00000363042 107 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 Y_RNA.114-201ENST00000363265 113 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 SNORA40.5-201ENST00000391061 128 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 U6atac.2-201ENST00000408644 118 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 UBL5P3-201ENST00000475112 231 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 RNU5E-3P-201ENST00000515913 68 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 RNA5SP24-201ENST00000516478 95 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 RNU6-589P-201ENST00000516485 107 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 RNA5SP490-201ENST00000517141 136 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 AC133485.4-201ENST00000561835 220 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 AC138907.4-201ENST00000570107 226 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 SNORD53-201ENST00000579969 78 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 MIR3117-201ENST00000584034 78 ntBASIC3.53□□□□□ -1.84
RTCBQ9Y3I0 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 RNU6-1209P-201ENST00000363655 107 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 Y_RNA.796-201ENST00000364268 102 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 Y_RNA.799-201ENST00000364992 102 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 RNU6-546P-201ENST00000383991 107 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 MLLT10P1-201ENST00000418346 262 ntBASIC3.52□□□□□ -1.85
RTCBQ9Y3I0 SNORD11-201ENST00000459124 84 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms