Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 RN7SL297P-201ENST00000483161 293 ntBASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 SNORA9.3-201ENST00000516383 129 ntBASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 Y_RNA.802-201ENST00000614892 130 ntBASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 U4atac.1-201ENST00000618345 95 ntBASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
PTPN22Q9Y2R2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.9□□□□□ -1.94
PTPN22Q9Y2R2 AC068700.1-201ENST00000565862 3754 ntBASIC2.9□□□□□ -1.94
PTPN22Q9Y2R2 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 snoU2_19.4-201ENST00000364329 80 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-144P-201ENST00000383951 107 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-959P-201ENST00000384671 107 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-376P-201ENST00000384731 106 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 MIR616-201ENST00000385293 97 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 SNORA12-201ENST00000391162 147 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 MIR300-201ENST00000401138 83 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 CR769767.1-201ENST00000436337 346 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 HMGN2P9-201ENST00000476875 229 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-479P-201ENST00000516348 105 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 AL391903.3-201ENST00000612158 163 ntBASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.9□□□□□ -1.95
PTPN22Q9Y2R2 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 U8.9-201ENST00000365667 134 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 RNU2-32P-201ENST00000411193 191 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 AC009238.1-201ENST00000442165 424 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 AC009237.6-201ENST00000446969 424 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 HSPE1P13-201ENST00000451143 297 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 MIR3605-201ENST00000583214 100 ntBASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PTPN22Q9Y2R2 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 AC009487.4-201ENST00000624969 3585 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-1048P-201ENST00000364054 107 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-1305P-201ENST00000364353 104 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-22P-201ENST00000384355 107 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 Y_RNA.586-201ENST00000391146 98 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 SNORA26.7-201ENST00000391288 122 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU2-51P-201ENST00000410708 197 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RPS12P2-201ENST00000439728 269 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 AC010409.1-201ENST00000487382 476 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 AC107027.2-201ENST00000512197 115 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 SNORD116-25-201ENST00000516517 92 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-62P-201ENST00000516526 102 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-1098P-201ENST00000516772 96 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 AC018630.3-201ENST00000542637 96 ntBASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.88□□□□□ -1.95
PTPN22Q9Y2R2 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 Y_RNA.293-201ENST00000364908 93 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 SNORD50B-201ENST00000364995 70 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 MIR569-201ENST00000385228 96 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 MIR873-201ENST00000401120 77 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 RPL23AP7-203ENST00000449021 469 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 RNU7-141P-201ENST00000459304 62 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 RPL36AP21-201ENST00000490372 323 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 AC234781.5-201ENST00000508429 271 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 RNU5F-4P-201ENST00000516581 114 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 AC022616.8-201ENST00000533569 253 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 AC109810.1-201ENST00000534066 224 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 MIR4635-201ENST00000583759 79 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.87□□□□□ -1.95
PTPN22Q9Y2R2 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-1205P-201ENST00000363625 106 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 AL359511.1-201ENST00000402970 211 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 MIR1283-1-201ENST00000408494 87 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 AC074290.1-201ENST00000448883 135 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 RN7SL499P-201ENST00000481141 276 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 MIR548X2-201ENST00000579776 100 ntBASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
PTPN22Q9Y2R2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-944P-201ENST00000364023 107 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 RNU6-151P-201ENST00000364158 107 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 AC114982.1-201ENST00000469402 321 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 SCARNA8-201ENST00000515924 131 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 RNA5SP281-201ENST00000516504 135 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 DNAJC19P2-201ENST00000593340 302 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 AC091895.1-201ENST00000624494 256 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.85□□□□□ -1.95
PTPN22Q9Y2R2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 214.9 ms