Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 AC093023.1-201ENST00000547375 507 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 ZNF519P2-201ENST00000557032 169 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 MIR3684-201ENST00000579779 74 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 AL357075.2-201ENST00000614906 189 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 U6.115-201ENST00000636045 103 ntBASIC0.18□□□□□ -2.38
HHLA3Q9XRX5 AL589743.1-201ENST00000551932 2712 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 SNORD113.3-201ENST00000364630 78 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.373-201ENST00000365600 103 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 SNORD14.1-201ENST00000365609 90 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.533-201ENST00000384596 114 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 MIR140-201ENST00000385282 100 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1068P-201ENST00000410958 103 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1001P-201ENST00000411265 100 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AC092447.3-201ENST00000426027 686 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AL392103.1-201ENST00000447000 198 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 RNU6-956P-201ENST00000458868 103 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 RNU6-1114P-201ENST00000516022 107 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.665-201ENST00000516177 98 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 SNORA18.7-201ENST00000516910 131 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AC019193.3-201ENST00000609144 554 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AL591926.4-201ENST00000616895 298 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 Z69908.1-201ENST00000622603 247 ntBASIC0.17□□□□□ -2.38
HHLA3Q9XRX5 AC090625.1-201ENST00000357130 210 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNA5SP48-201ENST00000363969 126 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNU6-454P-201ENST00000364292 107 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC117470.1-201ENST00000381974 330 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 MIR598-201ENST00000384868 97 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 MIR329-1-201ENST00000385028 80 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 MIR136-201ENST00000385207 82 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.582-201ENST00000391023 95 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 MIR873-201ENST00000401120 77 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNA5SP95-201ENST00000410319 137 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 Y_RNA.615-201ENST00000410769 117 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNU7-66P-201ENST00000459469 62 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC108740.1-201ENST00000498629 225 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNU11-2P-201ENST00000516898 142 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 MIR4300-201ENST00000581016 96 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC125232.2-201ENST00000592457 143 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC124303.1-201ENST00000605703 360 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC005828.6-201ENST00000606610 232 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 AC092954.2-201ENST00000609103 430 ntBASIC0.16□□□□□ -2.38
HHLA3Q9XRX5 RNU6-369P-201ENST00000362515 102 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 SNORD114-23-201ENST00000363536 72 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 U8.5-201ENST00000364528 136 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.269-201ENST00000364685 89 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 USP9YP16-201ENST00000430287 407 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 UQCRBP2-201ENST00000447827 297 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 USP9YP23-201ENST00000455085 407 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 snoU13.18-201ENST00000459483 104 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 LRRC34P1-201ENST00000542742 915 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 AL158211.1-201ENST00000566763 763 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 MIR4762-201ENST00000585261 75 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 AC068137.3-201ENST00000639191 341 ntBASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.15□□□□□ -2.39
HHLA3Q9XRX5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 MIR1-1-201ENST00000362147 71 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.135-201ENST00000363439 95 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 RNU6-595P-201ENST00000363944 107 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.359-201ENST00000365498 102 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.481-201ENST00000384373 102 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 RNU6-342P-201ENST00000384521 104 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 SNORA2B-201ENST00000384583 137 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 RNU6-1105P-201ENST00000384774 107 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 MIR216A-201ENST00000385063 110 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 RNA5SP511-201ENST00000410487 115 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AL354751.2-201ENST00000415471 210 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AL390729.2-201ENST00000416137 156 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 RNU7-43P-201ENST00000516554 64 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC145350.1-201ENST00000567426 208 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 MIR3672-201ENST00000584290 82 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC010525.2-201ENST00000590920 195 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC119751.7-201ENST00000600494 245 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC104695.3-201ENST00000604052 296 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC023510.2-201ENST00000622162 746 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 AC008133.2-201ENST00000624540 351 ntBASIC0.14□□□□□ -2.39
HHLA3Q9XRX5 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 MIR103A1-201ENST00000362165 78 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 MIR410-201ENST00000362222 80 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.106-201ENST00000363189 100 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 RNU6-1085P-201ENST00000363576 107 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.212-201ENST00000364177 102 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 RNY1-201ENST00000364228 113 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 Y_RNA.355-201ENST00000365462 98 ntBASIC0.13□□□□□ -2.39
HHLA3Q9XRX5 RNU6-1145P-201ENST00000384246 107 ntBASIC0.13□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms