Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 AL049830.1-201ENST00000468034 425 ntBASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 RNU2-27P-201ENST00000516185 142 ntBASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 AL591926.4-201ENST00000616895 298 ntBASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 MIR7153-201ENST00000637758 57 ntBASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 Z83843.1-201ENST00000604070 3685 ntBASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXD3Q9UJU5 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 SNORA1B-201ENST00000362535 133 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 RNU6-429P-201ENST00000384582 108 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 SNORD72-201ENST00000390994 80 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 SNORA11.2-201ENST00000408318 127 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 RNA5SP120-201ENST00000410900 112 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 AC006028.1-201ENST00000438379 402 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 RN7SKP282-201ENST00000516824 299 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 Y_RNA.709-201ENST00000516952 92 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 AC026333.2-201ENST00000542164 106 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 AC091544.4-201ENST00000555268 342 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 AC026271.5-201ENST00000577873 130 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 MIR4425-201ENST00000580572 84 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 MIR3200-201ENST00000580767 85 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 MIR3129-201ENST00000581095 76 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 MIR6129-201ENST00000616087 109 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 AC022149.2-201ENST00000621061 203 ntBASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXD3Q9UJU5 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 SNORA33-201ENST00000363664 130 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 RNU6-309P-201ENST00000364573 106 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 SNORD58C-201ENST00000365223 64 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 SNORA1-201ENST00000384107 130 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 SNORD61-201ENST00000384252 73 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 MIR522-201ENST00000385071 87 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 RNY4P18-201ENST00000391107 89 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 Z92545.1-201ENST00000411782 234 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 SNRPGP13-201ENST00000442212 177 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 RNU6-1061P-201ENST00000516530 99 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 MTND5P34-201ENST00000568888 325 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 MIR3651-201ENST00000630427 90 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
FOXD3Q9UJU5 MIR490-201ENST00000384865 128 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 MIR634-201ENST00000385208 97 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 NDUFB4P4-201ENST00000404822 243 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 MIR4762-201ENST00000585261 75 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AL670379.3-201ENST00000605040 251 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AL022345.2-201ENST00000606307 135 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AC004832.5-201ENST00000608677 401 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 U4.6-201ENST00000621618 127 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 AL136360.1-201ENST00000503377 1900 ntBASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
FOXD3Q9UJU5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RNU4-35P-201ENST00000362588 141 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RNA5SP493-201ENST00000364115 91 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 U8.5-201ENST00000364528 136 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 MIR802-201ENST00000390235 94 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RN7SKP220-201ENST00000410611 288 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 AC005326.1-201ENST00000429197 123 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 AL163195.1-201ENST00000496941 348 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 PDCD5P2-201ENST00000507570 312 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RNU6-589P-201ENST00000516485 107 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RNU6-1270P-201ENST00000517128 108 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 RN7SKP57-201ENST00000517248 293 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 MIR3169-201ENST00000578032 83 ntBASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.09□□□□□ -1.91
FOXD3Q9UJU5 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
FOXD3Q9UJU5 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
FOXD3Q9UJU5 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
FOXD3Q9UJU5 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
FOXD3Q9UJU5 Y_RNA.346-201ENST00000365385 112 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 SNORA11.4-201ENST00000408823 129 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 AC092427.1-202ENST00000430569 476 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 BX510359.1-201ENST00000456973 237 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 AC096725.1-201ENST00000514266 313 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 RNU6-693P-201ENST00000516134 107 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 RNA5SP236-201ENST00000516169 116 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 Y_RNA.666-201ENST00000516187 112 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 RNU6-113P-201ENST00000516653 101 ntBASIC3.08□□□□□ -1.92
FOXD3Q9UJU5 AC005000.2-201ENST00000605468 310 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms