Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 SNORA16.1-201ENST00000364597 132 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 RNU6-326P-201ENST00000365480 107 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 RNU6-160P-201ENST00000384591 107 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 Y_RNA.618-201ENST00000410949 107 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC008134.1-201ENST00000420943 193 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 RPL39P38-201ENST00000467018 153 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC055731.1-201ENST00000474387 401 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC091959.1-201ENST00000495857 238 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.94□□□□□ -2.1
SIX4Q9UIU6 MIR4529-201ENST00000578110 78 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 MIR3128-201ENST00000581957 66 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.94□□□□□ -2.1
SIX4Q9UIU6 AL159152.1-201ENST00000635019 2587 ntBASIC1.94□□□□□ -2.1
SIX4Q9UIU6 RNU6-1266P-201ENST00000362794 105 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 Y_RNA.188-201ENST00000363952 111 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 SNORA16B-201ENST00000364674 135 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 RNU6-1240P-201ENST00000365155 104 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 RNU4-52P-201ENST00000384209 138 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 AL135790.2-201ENST00000437701 267 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 MTND4LP30-201ENST00000454092 297 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 RNU6-1271P-201ENST00000517049 105 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 RNU2-19P-201ENST00000517288 84 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.93□□□□□ -2.1
SIX4Q9UIU6 AC037487.3-201ENST00000606668 112 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.93□□□□□ -2.1
SIX4Q9UIU6 MIR6715A-201ENST00000615929 79 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 U2.14-201ENST00000615943 113 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 MIR7843-201ENST00000622274 79 ntBASIC1.93□□□□□ -2.1
SIX4Q9UIU6 AL359851.1-201ENST00000569460 4997 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 SNORA27.1-201ENST00000362604 124 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNA5SP493-201ENST00000364115 91 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 MIR873-201ENST00000401120 77 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 SUMO2P12-201ENST00000405924 140 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 AL603910.2-201ENST00000407268 136 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNU2-40P-201ENST00000410833 196 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 BX510359.4-201ENST00000423750 193 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 AL591806.2-201ENST00000433122 173 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RPL23AP42-201ENST00000471152 471 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 AC010598.1-201ENST00000510378 103 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 AC011406.1-201ENST00000512440 370 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNU6-1041P-201ENST00000516254 102 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNU6-191P-201ENST00000516295 94 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 Y_RNA.673-201ENST00000516306 88 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 RNA5SP137-201ENST00000516833 135 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 MIR3169-201ENST00000578032 83 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 AC084768.2-201ENST00000622736 221 ntBASIC1.92□□□□□ -2.1
SIX4Q9UIU6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SIX4Q9UIU6 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SIX4Q9UIU6 CENPCP1-201ENST00000533085 2578 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 Y_RNA.54-201ENST00000362766 105 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU6-23P-201ENST00000363283 107 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 SNORD27-201ENST00000363981 72 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 Y_RNA.287-201ENST00000364853 94 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU6-407P-201ENST00000365280 104 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU6-514P-201ENST00000384208 107 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 MT-TG-201ENST00000387429 68 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU2-61P-201ENST00000411069 191 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 HMGN2P34-201ENST00000437647 269 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 AC245102.2-201ENST00000448956 180 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU1-131P-201ENST00000458943 161 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
SIX4Q9UIU6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 MIR3684-201ENST00000579779 74 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.91□□□□□ -2.1
SIX4Q9UIU6 AC022513.1-201ENST00000624512 117 ntBASIC1.91□□□□□ -2.1
SIX4Q9UIU6 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SIX4Q9UIU6 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
SIX4Q9UIU6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.9□□□□□ -2.1
SIX4Q9UIU6 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.44-201ENST00000362676 108 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 snoU2-30.2-201ENST00000362805 70 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 SNORA33-201ENST00000363664 130 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.172-201ENST00000363765 102 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.277-201ENST00000364754 102 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.352-201ENST00000365439 102 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 Y_RNA.416-201ENST00000384014 113 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 RNU6-662P-201ENST00000384253 104 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 RNU6-417P-201ENST00000384712 107 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 MIR597-201ENST00000384968 97 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 MIR548H3-201ENST00000408771 118 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 SUMO1P2-201ENST00000452524 304 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 RPS26P55-201ENST00000471178 356 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 RPS27P22-201ENST00000478056 241 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 AC010409.1-201ENST00000487382 476 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 RNU6-250P-201ENST00000516958 103 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.9□□□□□ -2.11
SIX4Q9UIU6 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.9□□□□□ -2.11
SIX4Q9UIU6 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
SIX4Q9UIU6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
SIX4Q9UIU6 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SIX4Q9UIU6 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
SIX4Q9UIU6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.89□□□□□ -2.11
SIX4Q9UIU6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms