Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 SNX2P2-201ENST00000424553 323 ntBASIC1.49□□□□□ -2.17
CPSF2Q9P2I0 RNU6-63P-201ENST00000516690 95 ntBASIC1.49□□□□□ -2.17
CPSF2Q9P2I0 AP001094.1-201ENST00000579805 193 ntBASIC1.49□□□□□ -2.17
CPSF2Q9P2I0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CPSF2Q9P2I0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 RNU6-505P-201ENST00000384427 107 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 AL031003.1-201ENST00000404229 172 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 MTATP6P23-201ENST00000440153 476 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 AP002004.2-201ENST00000531656 154 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 MIR4255-201ENST00000579351 72 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 MIR4795-201ENST00000584182 89 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 AC006380.1-201ENST00000603598 186 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
CPSF2Q9P2I0 RNU6-626P-201ENST00000363354 107 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 Y_RNA.252-201ENST00000364556 101 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 Y_RNA.315-201ENST00000365117 102 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 MIR520G-201ENST00000385064 90 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 CALM2P4-201ENST00000430810 426 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 OR9P1P-201ENST00000496431 281 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 Y_RNA.661-201ENST00000516003 99 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 RNU6-966P-201ENST00000516479 104 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 RNU6-548P-201ENST00000517083 115 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 RNU6-1096P-201ENST00000517089 102 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 AC092447.9-201ENST00000603395 144 ntBASIC1.47□□□□□ -2.17
CPSF2Q9P2I0 Y_RNA.5-201ENST00000362334 102 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 MT-TD-201ENST00000387419 68 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 RNU6-1199P-201ENST00000411249 104 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 CYCSP49-201ENST00000420810 319 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 AC092991.1-201ENST00000477176 376 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 SNORA70.12-201ENST00000516084 153 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 RNU6-976P-201ENST00000516086 111 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 RNU6-1337P-201ENST00000516525 95 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 LARP7P1-201ENST00000605576 316 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 MIR6715A-201ENST00000615929 79 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 MIR7843-201ENST00000622274 79 ntBASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF2Q9P2I0 Y_RNA.39-201ENST00000362620 98 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU4-79P-201ENST00000362764 141 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU1-115P-201ENST00000365329 160 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 Y_RNA.446-201ENST00000384178 104 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU6-136P-201ENST00000384663 107 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 MIR517C-201ENST00000385103 95 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 MIR1289-2-201ENST00000408360 111 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 HSPE1P13-201ENST00000451143 297 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RPL39P38-201ENST00000467018 153 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU6-155P-201ENST00000516347 100 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNA5SP168-201ENST00000516642 112 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU4-77P-201ENST00000516692 156 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 RNU7-28P-201ENST00000516759 62 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 MIR4778-201ENST00000577635 80 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 SNORD53B-201ENST00000577887 78 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 MIR5188-201ENST00000583467 113 ntBASIC1.45□□□□□ -2.18
CPSF2Q9P2I0 AC005592.1-201ENST00000566527 1640 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 Y_RNA.230-201ENST00000364348 109 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 RNA5SP190-201ENST00000365222 118 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 Y_RNA.579-201ENST00000390939 94 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 U8.16-201ENST00000391279 133 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 RNU2-61P-201ENST00000411069 191 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AL354751.2-201ENST00000415471 210 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 snoU13.23-201ENST00000458863 104 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 RPL30P7-201ENST00000479312 323 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 CYP3A52P-201ENST00000563326 91 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AC015720.1-201ENST00000565251 277 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 MIR3683-201ENST00000580847 82 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AL138825.1-201ENST00000618587 192 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AC106754.2-201ENST00000623006 233 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 AL606534.2-204ENST00000635008 178 ntBASIC1.44□□□□□ -2.18
CPSF2Q9P2I0 SNORD116-13-201ENST00000384408 92 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 RNU6-939P-201ENST00000384634 107 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 Y_RNA.570-201ENST00000384750 101 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 SNORA67.6-201ENST00000391093 99 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 RNA5SP482-201ENST00000391269 118 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 RNA5SP511-201ENST00000410487 115 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AL162725.1-201ENST00000435405 301 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AC233266.1-201ENST00000454518 96 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 SNORD13-201ENST00000459299 104 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AL358944.1-201ENST00000528537 144 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 RAB11AP2-201ENST00000545905 639 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 MIR3664-201ENST00000579074 99 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AC022441.3-201ENST00000605737 136 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 SNORD58B-201ENST00000607313 66 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AC242852.1-201ENST00000612151 96 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 AC244015.1-201ENST00000622301 99 ntBASIC1.43□□□□□ -2.18
CPSF2Q9P2I0 RNU6-324P-201ENST00000363957 106 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 RNU4-76P-201ENST00000364509 141 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 MTND4LP11-201ENST00000422184 280 ntBASIC1.42□□□□□ -2.18
CPSF2Q9P2I0 AL160004.2-201ENST00000432935 350 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms