Protein–RNA interactions for Protein: Q9P1Z3

HCN3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN3Q9P1Z3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 MIR4423-201ENST00000580922 80 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 ZNF355P-201ENST00000427301 3216 ntBASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
HCN3Q9P1Z3 AL356292.1-201ENST00000283110 373 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.329-201ENST00000365209 107 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AL078595.1-201ENST00000404458 226 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 COX6CP10-201ENST00000416832 224 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AC010154.1-201ENST00000425857 269 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AL606517.2-201ENST00000442855 241 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 RN7SL274P-201ENST00000492268 272 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 RNU6-764P-201ENST00000516396 105 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AC136932.1-201ENST00000574771 208 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AC113195.1-201ENST00000579952 141 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 MIR376A1-201ENST00000616574 68 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
HCN3Q9P1Z3 AC018630.2-201ENST00000534866 2403 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNU6-414P-201ENST00000363705 104 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.183-201ENST00000363882 113 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.210-201ENST00000364161 110 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 SNORD63-201ENST00000384262 68 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNU11-5P-201ENST00000391216 129 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RPL21P1-201ENST00000399532 476 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 Y_RNA.602-201ENST00000410535 92 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 AC245047.3-201ENST00000429428 127 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNU7-34P-201ENST00000459394 64 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNU7-94P-201ENST00000459576 63 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNY3P15-201ENST00000516297 97 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 RNU6-1337P-201ENST00000516525 95 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 AC022217.4-201ENST00000604389 163 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
HCN3Q9P1Z3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.84□□□□□ -2.12
HCN3Q9P1Z3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 SNORD113-8-201ENST00000363497 74 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.152-201ENST00000363578 100 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.422-201ENST00000384054 114 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 AL445685.2-201ENST00000422551 342 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 HMGN2P23-201ENST00000456759 269 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 HMGB3P17-201ENST00000504195 649 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 SEPT14P8-201ENST00000508026 178 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 AL442663.2-201ENST00000554385 511 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 AL355297.3-201ENST00000604082 446 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 MIR6079-201ENST00000635807 62 ntBASIC1.83□□□□□ -2.12
HCN3Q9P1Z3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.4-201ENST00000362333 112 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 SNORD114-7-201ENST00000362520 77 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.164-201ENST00000363709 102 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 RNU6-360P-201ENST00000390944 104 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AL590004.1-201ENST00000405321 300 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 SUMO2P12-201ENST00000405924 140 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 RNU6-985P-201ENST00000410182 104 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AC003989.2-201ENST00000440224 169 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 RPS27P1-201ENST00000450552 247 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AC091021.1-201ENST00000468051 388 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 MIR4709-201ENST00000577272 72 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 MIR4300-201ENST00000581016 96 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AC006504.6-201ENST00000590142 199 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AL929325.1-201ENST00000603096 117 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 SNORD113-5-201ENST00000607261 78 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 AC103810.8-201ENST00000607347 118 ntBASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
HCN3Q9P1Z3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 RNU6-661P-201ENST00000362409 107 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.326-201ENST00000365176 113 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 RNU6-950P-201ENST00000384651 107 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC113618.1-201ENST00000416747 285 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 POLR2KP2-201ENST00000438155 177 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC233266.1-201ENST00000454518 96 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC025465.3-201ENST00000510570 311 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC110588.1-201ENST00000559699 137 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 MIR3145-201ENST00000580727 82 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 DEFB117-201ENST00000602356 141 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.812-201ENST00000610788 101 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC242852.1-201ENST00000612151 96 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.784-201ENST00000613803 101 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 MIR8074-201ENST00000615081 81 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.787-201ENST00000616522 101 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.780-201ENST00000617336 101 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 Y_RNA.801-201ENST00000619005 101 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 AC244015.1-201ENST00000622301 99 ntBASIC1.81□□□□□ -2.12
HCN3Q9P1Z3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 400.9 ms