Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 ELOCP21-201ENST00000412558 336 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC0.24□□□□□ -2.37
VAPAQ9P0L0 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC0.24□□□□□ -2.37
VAPAQ9P0L0 USMG5P1-201ENST00000425964 177 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 Y_RNA.665-201ENST00000516177 98 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 RNU6-1223P-201ENST00000517124 104 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 AL158211.1-201ENST00000566763 763 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 MIR4273-201ENST00000582824 84 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 AC119751.7-201ENST00000600494 245 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 AC023510.2-201ENST00000622162 746 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 U6.115-201ENST00000636045 103 ntBASIC0.24□□□□□ -2.37
VAPAQ9P0L0 MIR1-1-201ENST00000362147 71 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU6-654P-201ENST00000364373 107 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU1-133P-201ENST00000364867 167 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 SNORA2B-201ENST00000384583 137 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU6-306P-201ENST00000384617 107 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU1-139P-201ENST00000391307 165 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 Y_RNA.615-201ENST00000410769 117 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU6-1132P-201ENST00000459214 107 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU6-496P-201ENST00000516145 99 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 RNU6-405P-201ENST00000516637 110 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 Y_RNA.706-201ENST00000516933 99 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.23□□□□□ -2.37
VAPAQ9P0L0 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 AC243829.6-201ENST00000612652 106 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 AL591926.4-201ENST00000616895 298 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 MIR6513-201ENST00000621188 64 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 MIR6863-201ENST00000636112 90 ntBASIC0.23□□□□□ -2.37
VAPAQ9P0L0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.22□□□□□ -2.37
VAPAQ9P0L0 Y_RNA.359-201ENST00000365498 102 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AL390729.2-201ENST00000416137 156 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 RNU7-43P-201ENST00000516554 64 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 RNU11-2P-201ENST00000516898 142 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AC090617.3-201ENST00000573670 475 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AC010525.2-201ENST00000590920 195 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AC008133.2-201ENST00000624540 351 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 AC068137.3-201ENST00000639191 341 ntBASIC0.22□□□□□ -2.37
VAPAQ9P0L0 Y_RNA.106-201ENST00000363189 100 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 RNA5SP95-201ENST00000410319 137 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 RNU6-177P-201ENST00000411257 104 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 ELOCP24-201ENST00000456370 334 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.676-201ENST00000516393 96 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 RNU6-256P-201ENST00000516747 97 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC0.21□□□□□ -2.38
VAPAQ9P0L0 MIR4711-201ENST00000578274 70 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 AC121247.2-201ENST00000604776 136 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 AL357075.2-201ENST00000614906 189 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 MIR6734-201ENST00000621166 68 ntBASIC0.21□□□□□ -2.38
VAPAQ9P0L0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.21□□□□□ -2.38
VAPAQ9P0L0 ZNF299P-201ENST00000406845 1804 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 U8.5-201ENST00000364528 136 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.498-201ENST00000384460 102 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 MIR329-1-201ENST00000385028 80 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 MIR15B-201ENST00000385045 98 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 RNA5SP193-201ENST00000410353 107 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 RNA5SP511-201ENST00000410487 115 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AL354751.2-201ENST00000415471 210 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AC005534.2-201ENST00000431047 433 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 RNA5SP436-201ENST00000516020 115 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AC125232.2-201ENST00000592457 143 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AC104260.1-201ENST00000616660 539 ntBASIC0.2□□□□□ -2.38
VAPAQ9P0L0 AC090625.1-201ENST00000357130 210 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 RNU6-595P-201ENST00000363944 107 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 AC117470.1-201ENST00000381974 330 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 RNU6-342P-201ENST00000384521 104 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.553-201ENST00000384670 102 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 MIR216A-201ENST00000385063 110 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 AL392103.1-201ENST00000447000 198 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 SNORD123-201ENST00000459473 70 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 RNA5SP220-201ENST00000516298 104 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 MIR3672-201ENST00000584290 82 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 AC012433.1-201ENST00000588916 398 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 AC100812.1-201ENST00000607622 580 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.19□□□□□ -2.38
VAPAQ9P0L0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.18□□□□□ -2.38
VAPAQ9P0L0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.18□□□□□ -2.38
VAPAQ9P0L0 Y_RNA.212-201ENST00000364177 102 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 RNU6-454P-201ENST00000364292 107 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 MIR936-201ENST00000401264 98 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 MIR1302-7-201ENST00000408841 72 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 RNA5SP475-201ENST00000410568 110 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.18□□□□□ -2.38
VAPAQ9P0L0 MLLT10P1-201ENST00000418346 262 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 DLGAP5P1-201ENST00000430307 464 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.18□□□□□ -2.38
VAPAQ9P0L0 SEPT14P3-201ENST00000439401 183 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AL732372.2-207ENST00000445840 183 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 SEPT14P2-201ENST00000453405 183 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 SEPT14P4-201ENST00000513445 186 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AC074133.1-201ENST00000515696 183 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 FO082796.1-201ENST00000523795 183 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AC018448.1-201ENST00000552843 316 ntBASIC0.18□□□□□ -2.38
VAPAQ9P0L0 AL512360.1-201ENST00000555346 234 ntBASIC0.18□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms