Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SNORD115-30-201ENST00000364117 82 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.292-201ENST00000364904 97 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.332-201ENST00000365271 113 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORA11.4-201ENST00000408823 129 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.590-201ENST00000410140 107 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-651P-201ENST00000411040 105 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU2-61P-201ENST00000411069 191 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 AC123900.1-201ENST00000420390 96 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 AC016717.1-201ENST00000448918 286 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU7-120P-201ENST00000459334 63 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 AC091959.1-201ENST00000495857 238 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU7-193P-201ENST00000516723 65 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR4769-201ENST00000584126 77 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 DEFB117-201ENST00000602356 141 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 AC009831.4-201ENST00000620744 325 ntBASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.2□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR340-201ENST00000362125 95 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU4-80P-201ENST00000363200 141 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.150-201ENST00000363562 102 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-160P-201ENST00000384591 107 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORA40.19-201ENST00000390846 128 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-1248P-201ENST00000391096 64 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR1185-2-201ENST00000408687 86 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 U3.40-201ENST00000408706 208 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RNA5SP475-201ENST00000410568 110 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AL135790.2-201ENST00000437701 267 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AC074290.1-201ENST00000448883 135 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.638-201ENST00000459374 113 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AC114982.1-201ENST00000469402 321 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RPL23AP42-201ENST00000471152 471 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-436P-201ENST00000516171 114 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.679-201ENST00000516416 91 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AP002392.1-201ENST00000537692 208 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 AL512605.2-201ENST00000592972 256 ntBASIC2.19□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU4-52P-201ENST00000384209 138 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-975P-201ENST00000384296 105 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 HMGN2P39-201ENST00000398005 273 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 AC108210.2-201ENST00000503681 201 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 AC009127.3-201ENST00000570531 403 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR4448-201ENST00000584360 86 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 AC005828.6-201ENST00000606610 232 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 U6.115-201ENST00000636045 103 ntBASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.18□□□□□ -2.06
NCKIPSDQ9NZQ3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 Y_RNA.329-201ENST00000365209 107 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-1289P-201ENST00000384431 106 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-482P-201ENST00000391068 107 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AL031003.1-201ENST00000404229 172 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC016909.1-201ENST00000415916 166 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 HMGN2P3-201ENST00000433603 273 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 HMGN2P5-201ENST00000436882 273 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 MTND2P29-201ENST00000438595 412 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AL392103.1-201ENST00000447000 198 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORD2.1-201ENST00000458762 69 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU7-57P-201ENST00000459540 60 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC010531.2-201ENST00000465012 153 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-191P-201ENST00000516295 94 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AP005660.1-201ENST00000522972 293 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC024405.2-202ENST00000532731 184 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR4529-201ENST00000578110 78 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC006380.1-201ENST00000603598 186 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC072026.1-201ENST00000605023 201 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC073349.3-201ENST00000617616 186 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AC245060.5-201ENST00000610778 3293 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 ZNF355P-201ENST00000427301 3216 ntBASIC2.17□□□□□ -2.06
NCKIPSDQ9NZQ3 AL596028.1-201ENST00000326971 197 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-1020P-201ENST00000363684 107 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORA6-201ENST00000384033 151 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-418P-201ENST00000384035 107 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-662P-201ENST00000384253 104 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR518A2-201ENST00000384966 87 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 PCNPP3-201ENST00000393579 471 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-1212P-201ENST00000517023 104 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 SNORA31.25-201ENST00000517242 134 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 AC011921.3-201ENST00000605540 361 ntBASIC2.16□□□□□ -2.06
NCKIPSDQ9NZQ3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
NCKIPSDQ9NZQ3 RNU6-23P-201ENST00000363283 107 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 Y_RNA.217-201ENST00000364214 105 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 RNU11-3P-201ENST00000391111 133 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 AL355796.1-201ENST00000406706 323 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
NCKIPSDQ9NZQ3 BX510359.4-201ENST00000423750 193 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms