Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AL049830.1-201ENST00000468034 425 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 AC105758.1-201ENST00000506038 399 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-559P-201ENST00000516151 98 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-917P-201ENST00000516294 104 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 AC144568.1-201ENST00000520139 137 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 AC025253.1-201ENST00000613623 543 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.14□□□□□ -2.23
ZCCHC3Q9NUD5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 RNA5SP99-201ENST00000364020 114 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA25-201ENST00000384384 134 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.653-201ENST00000459091 95 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 AC082651.2-201ENST00000496833 166 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 PRDX4P1-201ENST00000507189 574 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-63P-201ENST00000516690 95 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 AL022345.2-201ENST00000606307 135 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
ZCCHC3Q9NUD5 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-926P-201ENST00000384075 107 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-136P-201ENST00000384663 107 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 FCF1P4-201ENST00000448326 183 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 AC093850.1-201ENST00000454121 251 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 ELOCP24-201ENST00000456370 334 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RPL30P15-201ENST00000457129 321 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RNU7-12P-201ENST00000516030 62 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA70.12-201ENST00000516084 153 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 SNORD116-28-201ENST00000516123 91 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RNA5SP404-201ENST00000517118 132 ntBASIC1.12□□□□□ -2.23
ZCCHC3Q9NUD5 RNU4-41P-201ENST00000364426 143 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA2.2-201ENST00000365473 135 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.390-201ENST00000383932 102 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AL451046.2-201ENST00000403074 277 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 RNA5SP511-201ENST00000410487 115 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1054P-201ENST00000411293 104 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 MRPS18CP6-201ENST00000423587 223 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 Z98949.2-201ENST00000440996 144 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 HSPE1P13-201ENST00000451143 297 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC233266.1-201ENST00000454518 96 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-322P-201ENST00000516010 103 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AL117336.2-201ENST00000602435 335 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC242852.1-201ENST00000612151 96 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC133104.2-201ENST00000615272 193 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AL353770.2-201ENST00000620024 78 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 AC244015.1-201ENST00000622301 99 ntBASIC1.11□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.101-201ENST00000363154 102 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA70.7-201ENST00000384159 133 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1297P-201ENST00000384415 104 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 SNORD78.2-201ENST00000391076 69 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU2-54P-201ENST00000410299 190 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 AL354751.2-201ENST00000415471 210 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 AL162725.1-201ENST00000435405 301 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU7-169P-201ENST00000459456 61 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA31.2-201ENST00000516019 134 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU7-40P-201ENST00000516397 64 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1337P-201ENST00000516525 95 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-1012P-201ENST00000516606 109 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 MIR4524B-201ENST00000581569 115 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 AC006380.1-201ENST00000603598 186 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 BX284668.6-201ENST00000606899 438 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 MIR6715A-201ENST00000615929 79 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 AC240442.1-201ENST00000616055 283 ntBASIC1.1□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.142-201ENST00000363491 102 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 RNY3P11-201ENST00000364153 102 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.387-201ENST00000383918 102 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 MIR559-201ENST00000385188 96 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 AL031003.1-201ENST00000404229 172 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 Y_RNA.605-201ENST00000410577 105 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 BTF3P4-201ENST00000418852 495 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 AC048334.1-201ENST00000477975 159 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 RPS23P4-201ENST00000487908 423 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA31.4-201ENST00000516049 129 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-277P-201ENST00000516272 106 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 RNU6-911P-201ENST00000516523 104 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 SNORA70.22-201ENST00000517160 124 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 AC138305.3-201ENST00000624988 240 ntBASIC1.09□□□□□ -2.23
ZCCHC3Q9NUD5 MIR378A-201ENST00000362177 66 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-490P-201ENST00000362985 107 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-833P-201ENST00000363486 107 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RNU6-1199P-201ENST00000411249 104 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 AP1B1P2-201ENST00000416196 106 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 AC099799.1-201ENST00000439809 192 ntBASIC1.08□□□□□ -2.24
ZCCHC3Q9NUD5 RPS4XP11-201ENST00000446897 772 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms