Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SMC4Q9NTJ3 ICE2P2-201ENST00000483823 2787 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 MIR126-201ENST00000362291 85 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.27-201ENST00000362540 103 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 SNORD33-201ENST00000362761 85 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNU1-115P-201ENST00000365329 160 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.431-201ENST00000384086 102 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNU6-20P-201ENST00000384106 107 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.460-201ENST00000384255 102 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNA5SP109-201ENST00000391010 116 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNU11-5P-201ENST00000391216 129 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 MIR1287-201ENST00000408492 90 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNA5SP475-201ENST00000410568 110 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 AL163540.1-201ENST00000485382 386 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNA5SP61-201ENST00000516453 100 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 RNU6-1153P-201ENST00000516760 105 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 MIR4438-201ENST00000585271 93 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 AC022217.4-201ENST00000604389 163 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 AL021879.1-201ENST00000611756 288 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 AC095038.3-201ENST00000634439 195 ntBASIC1.81□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.39-201ENST00000362620 98 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.148-201ENST00000363557 117 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.445-201ENST00000384168 102 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 SNORD78.2-201ENST00000391076 69 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 RNU4-62P-201ENST00000410125 130 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 RNU6-321P-201ENST00000410912 106 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 RNU6-1199P-201ENST00000411249 104 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 SNRPGP13-201ENST00000442212 177 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 FCF1P4-201ENST00000448326 183 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 RNA5SP445-201ENST00000515889 115 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 RN7SKP295-201ENST00000517264 153 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 AC015688.6-201ENST00000577737 104 ntBASIC1.8□□□□□ -2.12
SMC4Q9NTJ3 U8.1-201ENST00000362843 134 ntBASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 RNU6-203P-201ENST00000384038 104 ntBASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.458-201ENST00000384240 102 ntBASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 MTCO3P19-201ENST00000415864 321 ntBASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 SUMO1P2-201ENST00000452524 304 ntBASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SMC4Q9NTJ3 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RNU6-271P-201ENST00000363858 105 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 Y_RNA.243-201ENST00000364481 109 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RNU7-34P-201ENST00000459394 64 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RPS26P55-201ENST00000471178 356 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RPS27P22-201ENST00000478056 241 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AC097462.1-201ENST00000514125 324 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 SNORA40.14-201ENST00000516543 86 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RNU2-12P-201ENST00000517216 168 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AC020661.2-201ENST00000560114 134 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AC104695.3-201ENST00000604052 296 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 AL359821.1-201ENST00000605519 182 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 PART1_1.1-201ENST00000611761 217 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.78□□□□□ -2.12
SMC4Q9NTJ3 RNU6-1123P-201ENST00000362347 106 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 SNORD114-7-201ENST00000362520 77 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 SNORA27.1-201ENST00000362604 124 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 RNY1P10-201ENST00000363268 113 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 RNU6-407P-201ENST00000365280 104 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 MRPL42P3-201ENST00000401492 326 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 MRPL35P1-201ENST00000404272 572 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 RN7SKP200-201ENST00000410564 320 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 RNU6-130P-201ENST00000411112 103 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC004965.1-201ENST00000413033 213 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC010154.1-201ENST00000425857 269 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 MTCO2P12-201ENST00000427426 682 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC245047.3-201ENST00000429428 127 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC027119.1-201ENST00000440877 241 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC010655.3-201ENST00000478818 450 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC099513.1-201ENST00000490423 301 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 SNORA31.10-201ENST00000516482 106 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AL161670.1-201ENST00000554348 137 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 DNAJC19P9-201ENST00000555084 351 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC005828.6-201ENST00000606610 232 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 MIR8054-201ENST00000620877 86 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 AC018630.2-201ENST00000534866 2403 ntBASIC1.77□□□□□ -2.13
SMC4Q9NTJ3 Y_RNA.28-201ENST00000362554 111 ntBASIC1.76□□□□□ -2.13
SMC4Q9NTJ3 SNORA22B-201ENST00000383876 138 ntBASIC1.76□□□□□ -2.13
SMC4Q9NTJ3 RNU6-1310P-201ENST00000384153 107 ntBASIC1.76□□□□□ -2.13
SMC4Q9NTJ3 RNU6-1031P-201ENST00000384773 107 ntBASIC1.76□□□□□ -2.13
SMC4Q9NTJ3 MIR1302-11-201ENST00000408051 138 ntBASIC1.76□□□□□ -2.13
SMC4Q9NTJ3 MIR1302-9-201ENST00000408365 138 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 187.3 ms