Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 AC027279.3-201ENST00000625055 122 ntBASIC0.39□□□□□ -2.35
SDHAF3Q9NRP4 AC073544.1-201ENST00000600110 1595 ntBASIC0.39□□□□□ -2.35
SDHAF3Q9NRP4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
SDHAF3Q9NRP4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-595P-201ENST00000363944 107 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.796-201ENST00000364268 102 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.256-201ENST00000364594 104 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.799-201ENST00000364992 102 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-136P-201ENST00000384663 107 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 MIR329-1-201ENST00000385028 80 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 MIR520G-201ENST00000385064 90 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 MIR936-201ENST00000401264 98 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-908P-201ENST00000410160 94 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AC244098.3-201ENST00000424803 96 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 MTCYBP10-201ENST00000424905 650 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 USP9YP16-201ENST00000430287 407 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AC093019.1-201ENST00000443135 252 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 USP9YP23-201ENST00000455085 407 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-1132P-201ENST00000459214 107 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-496P-201ENST00000516145 99 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-63P-201ENST00000516690 95 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.704-201ENST00000516851 102 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AL358944.1-201ENST00000528537 144 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 MIR3684-201ENST00000579779 74 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 U6.115-201ENST00000636045 103 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 AC068700.1-201ENST00000565862 3754 ntBASIC0.38□□□□□ -2.35
SDHAF3Q9NRP4 ZNF299P-201ENST00000406845 1804 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.106-201ENST00000363189 100 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.355-201ENST00000365462 98 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-483P-201ENST00000384088 108 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.530-201ENST00000384587 101 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 MIR1298-201ENST00000408783 112 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 RNU2-66P-201ENST00000410650 161 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 AC092423.1-201ENST00000430165 186 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 UQCRBP2-201ENST00000447827 297 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 RPS20P10-201ENST00000451209 253 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 AC019235.1-201ENST00000503847 207 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-1281P-201ENST00000516223 105 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-1110P-201ENST00000516462 101 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 AC243829.6-201ENST00000612652 106 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 DISC2.1-201ENST00000612827 205 ntBASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.37□□□□□ -2.35
SDHAF3Q9NRP4 SNORD68-201ENST00000363214 84 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-1059P-201ENST00000363752 98 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-454P-201ENST00000364292 107 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 SNORD116-11-201ENST00000383882 92 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RNY1P8-201ENST00000383970 114 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-259P-201ENST00000383999 107 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.508-201ENST00000384502 114 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR452-201ENST00000385020 85 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR516B2-201ENST00000385190 85 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RNU1-119P-201ENST00000391122 165 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR873-201ENST00000401120 77 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 AC036111.3-201ENST00000526389 112 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR4711-201ENST00000578274 70 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR3611-201ENST00000584484 83 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 AC005828.6-201ENST00000606610 232 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 RN7SKP299-201ENST00000606679 301 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 AC078883.4-201ENST00000623218 367 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MIR6516-201ENST00000630554 81 ntBASIC0.36□□□□□ -2.35
SDHAF3Q9NRP4 MTND5P16-201ENST00000460269 1703 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-451P-201ENST00000362921 107 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-596P-201ENST00000365395 98 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.414-201ENST00000384011 101 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 RNU6-1237P-201ENST00000384777 107 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 MIR520C-201ENST00000385005 87 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 USMG5P1-201ENST00000425964 177 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 EIF1P2-201ENST00000428233 350 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 SNORA74.3-201ENST00000517108 154 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 AC011195.1-201ENST00000578177 177 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 MIR4273-201ENST00000582824 84 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 MIR3942-201ENST00000585264 109 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 AL162413.1-201ENST00000603198 110 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 MIR3974-201ENST00000637126 96 ntBASIC0.35□□□□□ -2.35
SDHAF3Q9NRP4 AL589743.1-201ENST00000551932 2712 ntBASIC0.34□□□□□ -2.35
SDHAF3Q9NRP4 Y_RNA.48-201ENST00000362710 103 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-1145P-201ENST00000384246 107 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 MIR598-201ENST00000384868 97 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 RNU6-332P-201ENST00000391193 108 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 Y_RNA.706-201ENST00000516933 99 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 AC090617.3-201ENST00000573670 475 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 AC100812.1-201ENST00000607622 580 ntBASIC0.34□□□□□ -2.36
SDHAF3Q9NRP4 AL591926.4-201ENST00000616895 298 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms