Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RNY3P11-201ENST00000364153 102 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 RNU6-454P-201ENST00000364292 107 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 RNU4-38P-201ENST00000364472 129 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 Y_RNA.248-201ENST00000364501 109 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 MIR7-2-201ENST00000384970 110 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 MRPL42P3-201ENST00000401492 326 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 Y_RNA.599-201ENST00000410489 109 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC091021.1-201ENST00000468051 388 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC092991.1-201ENST00000477176 376 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC097462.1-201ENST00000514125 324 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 RNA5SP480-201ENST00000516840 109 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AL121579.1-201ENST00000555129 305 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC004584.2-201ENST00000570407 410 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC080078.2-201ENST00000603766 501 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 PVT1_3.1-201ENST00000620853 95 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC092794.2-201ENST00000620933 563 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AL669831.3-213ENST00000636676 183 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 AC073544.1-201ENST00000600110 1595 ntBASIC0.99□□□□□ -2.25
TM9SF3Q9HD45 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 Y_RNA.72-201ENST00000362894 103 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 Y_RNA.267-201ENST00000364679 109 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU6-767P-201ENST00000384132 107 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 Y_RNA.482-201ENST00000384377 111 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU6-136P-201ENST00000384663 107 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 POLR2J4-204ENST00000418424 324 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 AC018865.2-201ENST00000423631 129 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 MTCYBP10-201ENST00000424905 650 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RPL30P15-201ENST00000457129 321 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU6-1291P-201ENST00000516591 104 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU6-63P-201ENST00000516690 95 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU7-172P-201ENST00000517125 64 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 AC018448.1-201ENST00000552843 316 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 AC104260.1-201ENST00000616660 539 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 PISRT1.1-201ENST00000616930 107 ntBASIC0.98□□□□□ -2.25
TM9SF3Q9HD45 RNU6-845P-201ENST00000362578 103 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-593P-201ENST00000364716 112 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-926P-201ENST00000384075 107 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-505P-201ENST00000384427 107 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 MT-TL1-201ENST00000386347 75 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 CALM2P4-201ENST00000430810 426 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 FGF7P6-202ENST00000451282 293 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AC093850.1-201ENST00000454121 251 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-625P-201ENST00000459412 107 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AC010598.1-201ENST00000510378 103 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 SNORA40.9-201ENST00000515895 93 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-922P-201ENST00000516753 99 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU6-165P-201ENST00000517170 99 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 SNORD3E-202ENST00000627253 216 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 MIR6079-201ENST00000635807 62 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 AC005592.1-201ENST00000566527 1640 ntBASIC0.97□□□□□ -2.25
TM9SF3Q9HD45 RNU5F-3P-201ENST00000363767 117 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 Y_RNA.279-201ENST00000364763 95 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 SNORD81.2-201ENST00000365153 76 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 RNU6-1264P-201ENST00000383891 107 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 Y_RNA.498-201ENST00000384460 102 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 MIR598-201ENST00000384868 97 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 MIR532-201ENST00000385025 91 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 Y_RNA.646-201ENST00000410980 101 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 RNU6-370P-201ENST00000411008 104 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 RAB28P5-201ENST00000427490 651 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 MTND1P2-201ENST00000430604 821 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 AC105758.1-201ENST00000506038 399 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 RNA5SP20-201ENST00000515976 84 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 AC055872.1-201ENST00000570978 278 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 MIR3973-201ENST00000579824 107 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 AL513534.2-201ENST00000603836 250 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 U6.115-201ENST00000636045 103 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 TPTEP1-208ENST00000636884 213 ntBASIC0.96□□□□□ -2.26
TM9SF3Q9HD45 SNORA27.1-201ENST00000362604 124 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 RNU6-1301P-201ENST00000362724 104 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 U8.16-201ENST00000391279 133 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 SNORD12B-201ENST00000410433 91 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 PCNPP5-201ENST00000452246 481 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 MIR2053-201ENST00000459295 91 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 RNU7-169P-201ENST00000459456 61 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 AC087588.2-201ENST00000617667 426 ntBASIC0.95□□□□□ -2.26
TM9SF3Q9HD45 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 SNORA1B-201ENST00000362535 133 ntBASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 RNU6-961P-201ENST00000363893 105 ntBASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 RNU6-310P-201ENST00000384655 107 ntBASIC0.94□□□□□ -2.26
TM9SF3Q9HD45 RNU6-376P-201ENST00000384731 106 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms