Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 MIR524-201ENST00000385242 87 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 RNU6-383P-201ENST00000410864 94 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 RNU7-26P-201ENST00000458980 63 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 Y_RNA.712-201ENST00000517011 92 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.88□□□□□ -1.95
CD248Q9HCU0 AC010297.1-201ENST00000623948 149 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 MIR203B-201ENST00000636080 86 ntBASIC2.88□□□□□ -1.95
CD248Q9HCU0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 RNY1P11-201ENST00000363759 113 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 RNU1-112P-201ENST00000364401 164 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 U8.7-201ENST00000364940 136 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 RNY3P5-201ENST00000384127 102 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 RNU4-43P-201ENST00000410628 137 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 RPS3P1-201ENST00000456781 192 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 SNORA31.15-201ENST00000516771 132 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 Y_RNA.709-201ENST00000516952 92 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 RNA5SP170-201ENST00000517150 101 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 MIR3945-201ENST00000581853 98 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CD248Q9HCU0 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.87□□□□□ -1.95
CD248Q9HCU0 AC080128.1-201ENST00000474389 1917 ntBASIC2.87□□□□□ -1.95
CD248Q9HCU0 CENPCP1-201ENST00000533085 2578 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 RNU4-82P-201ENST00000362443 140 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 MIR9-1-201ENST00000385198 89 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 MIR548B-201ENST00000385247 97 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 MIR147B-201ENST00000390185 80 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC011753.1-201ENST00000451001 220 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 SNORD109B-201ENST00000458961 67 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 SNORD109A-201ENST00000459128 67 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC117454.1-201ENST00000491120 168 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC023141.11-201ENST00000508864 202 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 HSPE1P18-201ENST00000517602 280 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC090142.3-201ENST00000519012 385 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 MTND5P34-201ENST00000568888 325 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 MIR4679-2-201ENST00000578358 77 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.86□□□□□ -1.95
CD248Q9HCU0 MIR548AY-201ENST00000617669 107 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.86□□□□□ -1.95
CD248Q9HCU0 AC068647.2-201ENST00000637380 353 ntBASIC2.86□□□□□ -1.95
CD248Q9HCU0 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 DEFA7P-201ENST00000382676 285 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 Y_RNA.584-201ENST00000391090 114 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 SNORA36B-201ENST00000410438 131 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 AC016925.1-201ENST00000458303 298 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 RNU7-115P-201ENST00000516433 55 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 Y_RNA.757-201ENST00000578934 114 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 AL031274.2-201ENST00000599419 203 ntBASIC2.85□□□□□ -1.95
CD248Q9HCU0 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CD248Q9HCU0 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.85□□□□□ -1.95
CD248Q9HCU0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
CD248Q9HCU0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
CD248Q9HCU0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
CD248Q9HCU0 AC069528.2-201ENST00000624849 1991 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-235P-201ENST00000362644 107 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-655P-201ENST00000362858 107 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-1255P-201ENST00000363434 112 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-1210P-201ENST00000363775 107 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 SNORD45.3-201ENST00000363836 72 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-1305P-201ENST00000364353 104 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-755P-201ENST00000364400 103 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU6-597P-201ENST00000365620 102 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 SNORA22-201ENST00000383907 134 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU1-52P-201ENST00000384190 164 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 MIR518C-201ENST00000384822 101 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 SNORA79-201ENST00000408376 140 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 Y_RNA.622-201ENST00000411091 108 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 AL158823.1-201ENST00000418441 478 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 CYCSP49-201ENST00000420810 319 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 RNU5E-3P-201ENST00000515913 68 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 MIR3613-201ENST00000579844 87 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 MIR4658-201ENST00000584344 65 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 AL049779.4-201ENST00000604500 156 ntBASIC2.84□□□□□ -1.95
CD248Q9HCU0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.83□□□□□ -1.96
CD248Q9HCU0 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 SNORD114-7-201ENST00000362520 77 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 SNORA25.7-201ENST00000364375 127 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 Y_RNA.294-201ENST00000364916 102 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 MIR592-201ENST00000384959 97 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 AL138827.1-201ENST00000402666 306 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 RNA5SP21-201ENST00000410917 96 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.83□□□□□ -1.96
CD248Q9HCU0 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.83□□□□□ -1.96
CD248Q9HCU0 AC080013.2-201ENST00000460866 323 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 196.4 ms