Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.287-201ENST00000364853 94 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 AL117342.1-201ENST00000404861 406 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNA5SP475-201ENST00000410568 110 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNU2-38P-201ENST00000410856 79 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 AL158823.1-201ENST00000418441 478 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 SNORD65B-201ENST00000459126 73 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNU6-1143P-201ENST00000516125 104 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNU6-1338P-201ENST00000516328 91 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNU6-155P-201ENST00000516347 100 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 CBX3P4-201ENST00000538909 354 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 SNORD113-5-201ENST00000607261 78 ntBASIC1.87□□□□□ -2.11
UPF2Q9HAU5 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPF2Q9HAU5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 AL356292.1-201ENST00000283110 373 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.172-201ENST00000363765 102 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 RNA5SP493-201ENST00000364115 91 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.237-201ENST00000364439 102 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 RNU6-290P-201ENST00000365212 101 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 SNORA20B-201ENST00000384220 132 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 MIR504-201ENST00000385065 83 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 U8.13-201ENST00000390842 128 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 RNA5SP465-201ENST00000391195 109 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 HSPE1P21-201ENST00000438283 308 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 AC005042.3-201ENST00000453230 174 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 TRBVB-201ENST00000477100 408 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 DEFB117-201ENST00000602356 141 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 U4.1-201ENST00000620349 87 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 AC006001.4-201ENST00000622243 395 ntBASIC1.86□□□□□ -2.11
UPF2Q9HAU5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.86□□□□□ -2.11
UPF2Q9HAU5 RNU1-42P-201ENST00000364033 160 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 RNU6-1310P-201ENST00000384153 107 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.562-201ENST00000384695 113 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 RNU6-713P-201ENST00000384761 107 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AL031003.1-201ENST00000404229 172 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AC099677.2-201ENST00000436385 175 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 HMGN2P34-201ENST00000437647 269 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.85□□□□□ -2.11
UPF2Q9HAU5 SNORD127-201ENST00000458892 86 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 RNU1-131P-201ENST00000458943 161 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AC114982.1-201ENST00000469402 321 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 SEPT14P8-201ENST00000508026 178 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 RNU2-34P-201ENST00000516534 121 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 DEFB108E-201ENST00000524692 240 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AC012433.1-201ENST00000588916 398 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 AC010900.2-201ENST00000604508 210 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 MIR8081-201ENST00000611533 95 ntBASIC1.85□□□□□ -2.11
UPF2Q9HAU5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
UPF2Q9HAU5 RNU4-90P-201ENST00000362773 141 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 SNORA72.2-201ENST00000365028 127 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.329-201ENST00000365209 107 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 Y_RNA.383-201ENST00000383855 97 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MIR597-201ENST00000384968 97 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 RNU11-3P-201ENST00000391111 133 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 RNU2-61P-201ENST00000411069 191 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MTCO1P5-201ENST00000433573 344 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MTND2P29-201ENST00000438595 412 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.84□□□□□ -2.11
UPF2Q9HAU5 RNU1-98P-201ENST00000458992 160 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 RNU7-128P-201ENST00000517247 62 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 AP005660.1-201ENST00000522972 293 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MIR4255-201ENST00000579351 72 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 AL773524.1-201ENST00000614065 229 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MIR7843-201ENST00000622274 79 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 MIR338-201ENST00000636369 67 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 U6.108-201ENST00000637764 58 ntBASIC1.84□□□□□ -2.11
UPF2Q9HAU5 AC068700.1-201ENST00000565862 3754 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
UPF2Q9HAU5 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
UPF2Q9HAU5 SNORA27.1-201ENST00000362604 124 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 RNU4-80P-201ENST00000363200 141 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 Y_RNA.136-201ENST00000363444 102 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 RNU6-21P-201ENST00000384710 107 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 MIR1302-6-201ENST00000408466 90 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 AC244636.1-201ENST00000421152 228 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.83□□□□□ -2.12
UPF2Q9HAU5 AC011406.1-201ENST00000512440 370 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 RNU6-1041P-201ENST00000516254 102 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.83□□□□□ -2.12
UPF2Q9HAU5 RPL21P9-201ENST00000556149 474 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 MIR4643-201ENST00000577473 78 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 AL159152.1-201ENST00000635019 2587 ntBASIC1.83□□□□□ -2.12
UPF2Q9HAU5 Y_RNA.14-201ENST00000362415 103 ntBASIC1.82□□□□□ -2.12
UPF2Q9HAU5 RNU6-702P-201ENST00000364982 107 ntBASIC1.82□□□□□ -2.12
UPF2Q9HAU5 Y_RNA.307-201ENST00000365022 117 ntBASIC1.82□□□□□ -2.12
UPF2Q9HAU5 RNU6-160P-201ENST00000384591 107 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms