Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 MIR3973-201ENST00000579824 107 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 AC211469.2-201ENST00000605461 205 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 AC073349.3-201ENST00000617616 186 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
RPAP3Q9H6T3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RNU6-454P-201ENST00000364292 107 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.265-201ENST00000364677 108 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RNU6-99P-201ENST00000364721 107 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RNU6-505P-201ENST00000384427 107 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 MIR660-201ENST00000385235 97 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RNU6-192P-201ENST00000391253 100 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 AC018865.2-201ENST00000423631 129 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 UBL5P1-201ENST00000507979 193 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RNA5SP168-201ENST00000516642 112 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 RN7SKP49-201ENST00000516675 260 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 AC005899.2-201ENST00000584353 90 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 AC092794.2-201ENST00000620933 563 ntBASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
RPAP3Q9H6T3 AC005592.1-201ENST00000566527 1640 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 CASC19-280ENST00000642102 1351 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 SNORA27.1-201ENST00000362604 124 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.124-201ENST00000363339 93 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 RNU6-376P-201ENST00000384731 106 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 FGF7P6-202ENST00000451282 293 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 RNU6-625P-201ENST00000459412 107 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AC116353.2-201ENST00000505332 712 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 RNU6-947P-201ENST00000516264 106 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 RPL21P9-201ENST00000556149 474 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AC136932.1-201ENST00000574771 208 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 MIR3684-201ENST00000579779 74 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 SNORA28-201ENST00000606769 126 ntBASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.12□□□□□ -2.23
RPAP3Q9H6T3 AL391516.1-201ENST00000554380 2449 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 MIR410-201ENST00000362222 80 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.160-201ENST00000363677 92 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 RNU6-767P-201ENST00000384132 107 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.540-201ENST00000384638 111 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 U8.16-201ENST00000391279 133 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AC233266.1-201ENST00000454518 96 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 RPL17P19-201ENST00000489069 552 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 RNU6-63P-201ENST00000516690 95 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AC091178.2-201ENST00000584401 117 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AC080078.2-201ENST00000603766 501 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AC242852.1-201ENST00000612151 96 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 AC244015.1-201ENST00000622301 99 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 U6.115-201ENST00000636045 103 ntBASIC1.11□□□□□ -2.23
RPAP3Q9H6T3 SNORA1B-201ENST00000362535 133 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 Y_RNA.112-201ENST00000363250 102 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RNU4-76P-201ENST00000364509 141 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RNU11-5P-201ENST00000391216 129 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RNA5SP475-201ENST00000410568 110 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RAB28P5-201ENST00000427490 651 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 SNORA40.9-201ENST00000515895 93 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RNU6-307P-201ENST00000516743 106 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 AL669831.3-213ENST00000636676 183 ntBASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RPAP3Q9H6T3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU6-926P-201ENST00000384075 107 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 AL137792.2-201ENST00000443484 235 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 HSPE1P13-201ENST00000451143 297 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 MIR2053-201ENST00000459295 91 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 OR9P1P-201ENST00000496431 281 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU2-56P-201ENST00000516826 190 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU6-341P-201ENST00000516973 96 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU6-1116P-201ENST00000517269 99 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 MTND4LP26-201ENST00000518144 282 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 AL513534.2-201ENST00000603836 250 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 MIR6857-201ENST00000613267 93 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 MIR3674-201ENST00000636576 68 ntBASIC1.09□□□□□ -2.23
RPAP3Q9H6T3 RNU6-845P-201ENST00000362578 103 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU6-1301P-201ENST00000362724 104 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNY3P11-201ENST00000364153 102 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 Y_RNA.279-201ENST00000364763 95 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU6-424P-201ENST00000384367 105 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU6-876P-201ENST00000391295 104 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 SNORD12B-201ENST00000410433 91 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 AC114482.1-201ENST00000418010 247 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 RNU6-408P-201ENST00000515910 100 ntBASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.08□□□□□ -2.24
RPAP3Q9H6T3 MIR4698-201ENST00000577795 80 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 176.9 ms