Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC008885.1-201ENST00000514930 301 ntBASIC4.97□□□□□ -1.61
RNF39Q9H2S5 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RNF39Q9H2S5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.96□□□□□ -1.61
RNF39Q9H2S5 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
RNF39Q9H2S5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC4.96□□□□□ -1.61
RNF39Q9H2S5 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.96□□□□□ -1.61
RNF39Q9H2S5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 A2MP1-204ENST00000566278 4130 ntBASIC4.96□□□□□ -1.62
RNF39Q9H2S5 Y_RNA.258-201ENST00000364613 105 ntBASIC4.96□□□□□ -1.62
RNF39Q9H2S5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 MIR6830-201ENST00000636015 70 ntBASIC4.96□□□□□ -1.62
RNF39Q9H2S5 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF39Q9H2S5 AL161431.1-201ENST00000618966 4205 ntBASIC4.96□□□□□ -1.62
RNF39Q9H2S5 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF39Q9H2S5 RNU2-48P-201ENST00000410694 191 ntBASIC4.95□□□□□ -1.62
RNF39Q9H2S5 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC4.95□□□□□ -1.62
RNF39Q9H2S5 U6.100-201ENST00000636230 99 ntBASIC4.95□□□□□ -1.62
RNF39Q9H2S5 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 RNU6-838P-201ENST00000363399 108 ntBASIC4.94□□□□□ -1.62
RNF39Q9H2S5 RNA5SP509-201ENST00000364577 119 ntBASIC4.94□□□□□ -1.62
RNF39Q9H2S5 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 AC104389.3-201ENST00000445629 235 ntBASIC4.94□□□□□ -1.62
RNF39Q9H2S5 PARP1P2-201ENST00000556806 195 ntBASIC4.94□□□□□ -1.62
RNF39Q9H2S5 MIR3690-201ENST00000580266 75 ntBASIC4.94□□□□□ -1.62
RNF39Q9H2S5 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF39Q9H2S5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 RNA5SP189-201ENST00000364920 115 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 RPS12P10-201ENST00000427031 377 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 AL117339.2-201ENST00000430475 180 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 RNU7-195P-201ENST00000458793 62 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 CKS1BP2-201ENST00000497342 240 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 RNA5SP137-201ENST00000516833 135 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 TVP23BP1-201ENST00000557500 617 ntBASIC4.93□□□□□ -1.62
RNF39Q9H2S5 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF39Q9H2S5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 MIR767-201ENST00000390228 109 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 RNU7-119P-201ENST00000459279 63 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 SCARNA14-201ENST00000516903 136 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 SNORA31.21-201ENST00000517180 77 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC100770.1-201ENST00000532310 322 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 MIR4491-201ENST00000581087 68 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC103810.8-201ENST00000607347 118 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC002076.2-201ENST00000617362 122 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 MIR5739-201ENST00000619803 80 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC006111.3-201ENST00000622137 383 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 AC008133.2-201ENST00000624540 351 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 STX3-208ENST00000641815 3236 ntBASIC4.92□□□□□ -1.62
RNF39Q9H2S5 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF39Q9H2S5 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.91□□□□□ -1.62
RNF39Q9H2S5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.91□□□□□ -1.62
RNF39Q9H2S5 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RNF39Q9H2S5 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RNF39Q9H2S5 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RNF39Q9H2S5 AC015912.2-201ENST00000571053 181 ntBASIC4.91□□□□□ -1.62
RNF39Q9H2S5 MIR548AO-201ENST00000579992 96 ntBASIC4.91□□□□□ -1.62
RNF39Q9H2S5 MIR548V-201ENST00000584165 80 ntBASIC4.91□□□□□ -1.62
RNF39Q9H2S5 MIR3138-201ENST00000585238 82 ntBASIC4.91□□□□□ -1.62
RNF39Q9H2S5 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF39Q9H2S5 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
RNF39Q9H2S5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
RNF39Q9H2S5 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RNF39Q9H2S5 MIR526A1-201ENST00000384897 85 ntBASIC4.9□□□□□ -1.63
RNF39Q9H2S5 RPS29P17-201ENST00000430795 166 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms