Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 RN7SKP284-201ENST00000411002 343 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 AC123900.1-201ENST00000420390 96 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS16Q9H269 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS16Q9H269 RNA5SP137-201ENST00000516833 135 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS16Q9H269 AC006380.1-201ENST00000603598 186 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 AC025754.2-201ENST00000606491 432 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 AC132825.6-201ENST00000638861 357 ntBASIC2.41□□□□□ -2.02
VPS16Q9H269 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS16Q9H269 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VPS16Q9H269 Y_RNA.99-201ENST00000363138 105 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 RNU6-1305P-201ENST00000364353 104 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 Y_RNA.243-201ENST00000364481 109 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 Y_RNA.361-201ENST00000365515 120 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 MIR548B-201ENST00000385247 97 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 TMSB4XP3-201ENST00000445144 114 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 MIR4672-201ENST00000583126 81 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 MIR5002-201ENST00000584713 97 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 AC108706.1-201ENST00000611053 297 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 MIR6852-201ENST00000621699 66 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 AC008873.1-201ENST00000625051 138 ntBASIC2.4□□□□□ -2.03
VPS16Q9H269 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.39□□□□□ -2.03
VPS16Q9H269 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.39□□□□□ -2.03
VPS16Q9H269 AL596028.1-201ENST00000326971 197 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 RNU6-1130P-201ENST00000365434 107 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 Y_RNA.412-201ENST00000384001 104 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 SNORA40.19-201ENST00000390846 128 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 RNU6-1248P-201ENST00000391096 64 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 MIR548I2-201ENST00000408348 149 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 RNU2-2P-201ENST00000410396 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 AL606753.1-201ENST00000427435 87 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 AC100767.1-201ENST00000528178 123 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 RNU2-4P-201ENST00000606190 192 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.15-201ENST00000611544 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.16-201ENST00000613119 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.12-201ENST00000613778 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.9-201ENST00000615427 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.11-201ENST00000616345 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.2-201ENST00000616535 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.3-201ENST00000617785 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.19-201ENST00000618602 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 RNU2-1-201ENST00000618664 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.6-201ENST00000619225 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.5-201ENST00000619465 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 U2.10-201ENST00000620268 191 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
VPS16Q9H269 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VPS16Q9H269 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
VPS16Q9H269 RNU6-1048P-201ENST00000364054 107 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 RNU6-704P-201ENST00000364162 103 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 Y_RNA.238-201ENST00000364441 102 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 SNORA6-201ENST00000384033 151 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 Y_RNA.500-201ENST00000384466 111 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 MIR29C-201ENST00000385231 88 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 MIR613-201ENST00000385248 95 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 TOMM22P2-201ENST00000430735 237 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.38□□□□□ -2.03
VPS16Q9H269 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.38□□□□□ -2.03
VPS16Q9H269 RNU6-948P-201ENST00000516374 107 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
VPS16Q9H269 AC136628.3-201ENST00000521868 290 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 MIR6840-201ENST00000611937 71 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 AL078604.3-201ENST00000615580 211 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 AC009487.4-201ENST00000624969 3585 ntBASIC2.38□□□□□ -2.03
VPS16Q9H269 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
VPS16Q9H269 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
VPS16Q9H269 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
VPS16Q9H269 Y_RNA.7-201ENST00000362352 102 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 U3.8-201ENST00000363675 217 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 RNU4-10P-201ENST00000364383 140 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 Y_RNA.272-201ENST00000364696 102 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 SNORD50.2-201ENST00000365465 70 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 RNU4-17P-201ENST00000365598 141 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 SNORD14D-201ENST00000384390 87 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 MIR1262-201ENST00000408276 93 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.37□□□□□ -2.03
VPS16Q9H269 UBE2DNL-203ENST00000474922 222 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 HMGN2P9-201ENST00000476875 229 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 RNU2-34P-201ENST00000516534 121 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.37□□□□□ -2.03
VPS16Q9H269 AL031274.2-201ENST00000599419 203 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 AC004832.4-201ENST00000608952 331 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 U6.115-201ENST00000636045 103 ntBASIC2.37□□□□□ -2.03
VPS16Q9H269 AC134026.1-201ENST00000623249 2239 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 RNU6-818P-201ENST00000364837 108 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 RNU6-975P-201ENST00000384296 105 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 Y_RNA.580-201ENST00000391004 95 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 RNU6-381P-201ENST00000391259 108 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 RNA5SP270-201ENST00000411361 118 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 SNORA59A-201ENST00000459326 152 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.36□□□□□ -2.03
VPS16Q9H269 AC022202.1-201ENST00000613515 211 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 AC013791.1-201ENST00000616619 62 ntBASIC2.36□□□□□ -2.03
VPS16Q9H269 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.36□□□□□ -2.03
VPS16Q9H269 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VPS16Q9H269 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.35□□□□□ -2.03
VPS16Q9H269 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms