Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 SNORA12-201ENST00000391162 147 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 RNY4P30-201ENST00000410216 95 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-1077P-201ENST00000410506 102 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 Z98742.3-201ENST00000418637 326 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 ARF4P2-201ENST00000430209 526 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-221P-201ENST00000459541 99 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-1337P-201ENST00000516525 95 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 AC245166.1-201ENST00000521012 253 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 AL160236.1-201ENST00000556317 195 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 MIR4635-201ENST00000583759 79 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 POLR3GP1-201ENST00000594073 261 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 RPL30P11-203ENST00000598995 310 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 AC008555.8-201ENST00000623602 2168 ntBASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CNTNAP4Q9C0A0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-1082P-201ENST00000364574 107 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 AL355796.1-201ENST00000406706 323 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RN7SKP223-201ENST00000410582 62 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 Y_RNA.651-201ENST00000459380 103 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RN7SL75P-201ENST00000461926 281 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 SNORA9.3-201ENST00000516383 129 ntBASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-975P-201ENST00000384296 105 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 AP000567.1-201ENST00000406413 156 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 MIR1278-201ENST00000408753 81 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 RNA5SP425-201ENST00000410336 112 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 RNY4P29-201ENST00000410801 97 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 AC245047.4-201ENST00000433189 144 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 RPS29P6-201ENST00000438196 145 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 RPS26P55-201ENST00000471178 356 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 RNU6-948P-201ENST00000516374 107 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 AC068657.1-201ENST00000520807 306 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 AC015712.3-201ENST00000559380 164 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 AC103810.1-201ENST00000579873 453 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 MIR378D2-201ENST00000580636 98 ntBASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CNTNAP4Q9C0A0 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.116-201ENST00000363292 103 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 RNA5SP252-201ENST00000391131 119 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-383P-201ENST00000410864 94 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 RN7SKP101-201ENST00000411376 320 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 SNORD65B-201ENST00000459126 73 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 RNU7-14P-201ENST00000459331 62 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-437P-201ENST00000459408 95 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 MIR3121-201ENST00000579680 77 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 MIR4765-201ENST00000585007 77 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 AC012531.5-201ENST00000611375 151 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 U6.95-201ENST00000636931 70 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 Z82209.1-201ENST00000422141 2135 ntBASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CNTNAP4Q9C0A0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-486P-201ENST00000363116 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 U8.6-201ENST00000364939 135 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-32P-201ENST00000383948 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-13P-201ENST00000384248 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-905P-201ENST00000384434 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-12P-201ENST00000384604 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-41P-201ENST00000384741 107 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 MIR767-201ENST00000390228 109 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 SNORA12.1-201ENST00000390873 148 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 AL135786.1-201ENST00000415892 214 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 Z98742.2-201ENST00000431564 187 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 SNRPGP8-201ENST00000454064 226 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.677-201ENST00000516401 85 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-548P-201ENST00000517083 115 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-762P-201ENST00000517107 102 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 AC093331.1-201ENST00000521474 169 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 Y_RNA.757-201ENST00000578934 114 ntBASIC3.26□□□□□ -1.89
CNTNAP4Q9C0A0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 SNORD31B-201ENST00000364977 69 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-1336P-201ENST00000383886 109 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 SNORD116-21-201ENST00000384507 92 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 MIR764-201ENST00000390811 85 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 RNU6-482P-201ENST00000391068 107 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 RNA5SP354-201ENST00000391247 136 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 RPL21P3-201ENST00000395517 478 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 AC008134.1-201ENST00000420943 193 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 AP004217.1-201ENST00000480579 346 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 MIR4648-201ENST00000580107 72 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 AL670379.3-201ENST00000605040 251 ntBASIC3.25□□□□□ -1.89
CNTNAP4Q9C0A0 uc_338.28-201ENST00000612082 187 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms