Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 RN7SL504P-201ENST00000494496 287 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 PHBP14-201ENST00000512887 367 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.705-201ENST00000516862 110 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 YPEL5P3-201ENST00000547227 352 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 MIR4765-201ENST00000585007 77 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 AC073413.2-201ENST00000604332 360 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 AC090517.3-201ENST00000625170 141 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 MIR1255B1-201ENST00000636325 63 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.64□□□□□ -1.83
CNTNAP3Q9BZ76 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 ZNF962P-201ENST00000443465 3140 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-661P-201ENST00000362409 107 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.95-201ENST00000363079 95 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RNU1-96P-201ENST00000364163 162 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-1083P-201ENST00000384022 107 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 SNORA18-201ENST00000384416 132 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RNY1P4-201ENST00000384595 115 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 MIR605-201ENST00000385078 83 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 HMGN2P8-201ENST00000391458 268 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RPS12P18-201ENST00000442381 270 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 AL031183.1-201ENST00000457667 207 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 RNU1-131P-201ENST00000458943 161 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.773-201ENST00000607168 90 ntBASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CNTNAP3Q9BZ76 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-509P-201ENST00000363519 107 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.155-201ENST00000363632 101 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 SNORD35B-201ENST00000363660 87 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-590P-201ENST00000365039 107 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 MIR1179-201ENST00000408703 91 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 MIR1911-201ENST00000410783 80 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 RNU7-14P-201ENST00000459331 62 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 UBL5P3-201ENST00000475112 231 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 HMGN1P7-201ENST00000491722 313 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 AC025554.1-201ENST00000505641 188 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 AC009487.4-201ENST00000624969 3585 ntBASIC3.62□□□□□ -1.83
CNTNAP3Q9BZ76 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 SNORD45B-201ENST00000364617 72 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-1189P-201ENST00000383958 107 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-409P-201ENST00000384114 104 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 CYCSP4-201ENST00000429682 331 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-1231P-201ENST00000517185 103 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 AC022695.1-201ENST00000522089 237 ntBASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CNTNAP3Q9BZ76 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.191-201ENST00000363972 113 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 RNU4-67P-201ENST00000364569 141 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.377-201ENST00000365644 108 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 Y_RNA.467-201ENST00000384297 102 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 RNU4-69P-201ENST00000410677 143 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MIR2114-201ENST00000516645 80 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-1096P-201ENST00000517089 102 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MIR4438-201ENST00000585271 93 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 AL137790.1-201ENST00000634283 177 ntBASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CNTNAP3Q9BZ76 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 PWAR6-201ENST00000552334 4618 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 OTUD4P1-201ENST00000237841 3067 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 RNA5SP399-201ENST00000364003 117 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 SNORA14A-201ENST00000364773 135 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 AC003685.2-201ENST00000422795 395 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 AC010401.1-201ENST00000463867 348 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 RNU6-948P-201ENST00000516374 107 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 MIR4712-201ENST00000583750 82 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 MIR203B-201ENST00000636080 86 ntBASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CNTNAP3Q9BZ76 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.59□□□□□ -1.84
CNTNAP3Q9BZ76 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CNTNAP3Q9BZ76 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 RNU6-743P-201ENST00000364151 106 ntBASIC3.58□□□□□ -1.84
CNTNAP3Q9BZ76 Y_RNA.253-201ENST00000364562 112 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms