Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.79□□□□□ -1.96
TRIM55Q9BYV6 AL136360.1-201ENST00000503377 1900 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 SNORA36B-201ENST00000410438 131 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 AC108938.1-201ENST00000451204 136 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 AC091021.1-201ENST00000468051 388 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 AL163195.1-201ENST00000496941 348 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 HMGB3P3-201ENST00000510526 400 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 SCGB1D5P-201ENST00000515134 247 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 RNU1-104P-201ENST00000517280 175 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 Z83818.1-201ENST00000603584 150 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 AC069114.2-201ENST00000604699 304 ntBASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM55Q9BYV6 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 AC018630.2-201ENST00000534866 2403 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.308-201ENST00000365043 101 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.785-201ENST00000384290 109 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 SNORA72-201ENST00000384339 132 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 MIR520G-201ENST00000385064 90 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 RNU11-5P-201ENST00000391216 129 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 RNU2-64P-201ENST00000411315 191 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 AL138752.1-201ENST00000452964 351 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.644-201ENST00000459006 113 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 TRBV12-1-201ENST00000479785 344 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 RPL23AP54-201ENST00000495129 419 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.674-201ENST00000516362 113 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 RNU6-1096P-201ENST00000517089 102 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 MIR5094-201ENST00000578766 85 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 AC091178.2-201ENST00000584401 117 ntBASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM55Q9BYV6 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 RNU4-10P-201ENST00000364383 140 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 RNU6-923P-201ENST00000364753 107 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 RNU6-144P-201ENST00000383951 107 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 PIGPP3-201ENST00000425307 415 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 SNORA81.3-201ENST00000517283 198 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 CBX3P4-201ENST00000538909 354 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 MIR4529-201ENST00000578110 78 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 ZNF861P-201ENST00000588126 639 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 MIR6079-201ENST00000635807 62 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 ZNF271P-202ENST00000465539 1970 ntBASIC2.76□□□□□ -1.97
TRIM55Q9BYV6 AC007336.1-201ENST00000576365 3828 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 AC062016.1-201ENST00000355719 319 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.29-201ENST00000362570 113 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 SNORA48.1-201ENST00000390879 135 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 RNU6-493P-201ENST00000391321 108 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 MTND2P29-201ENST00000438595 412 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 RNVU1-2-201ENST00000516326 135 ntBASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.75□□□□□ -1.97
TRIM55Q9BYV6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 AC100821.1-201ENST00000523153 2479 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.150-201ENST00000363562 102 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 SNORA8.3-201ENST00000384679 139 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 MIR548I3-201ENST00000408378 149 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 MIR548I1-201ENST00000408810 149 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 RNA5SP184-201ENST00000411071 108 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 RNA5SP450-201ENST00000411206 102 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.793-201ENST00000411222 111 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 RNU6-1291P-201ENST00000516591 104 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 SNORA31.15-201ENST00000516771 132 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 AC011604.1-201ENST00000545978 196 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 Y_RNA.802-201ENST00000614892 130 ntBASIC2.74□□□□□ -1.97
TRIM55Q9BYV6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNA5SP393-201ENST00000363423 117 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNU6-1020P-201ENST00000363684 107 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 SNORA25.6-201ENST00000364121 118 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNU4-17P-201ENST00000365598 141 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 DEFA7P-201ENST00000382676 285 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 MIR526A2-201ENST00000390198 65 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNA5SP501-201ENST00000410990 112 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 AC245047.4-201ENST00000433189 144 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 SUMO1P3-201ENST00000439961 304 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNU6-437P-201ENST00000459408 95 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 RNU7-94P-201ENST00000459576 63 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 AC084364.2-201ENST00000546924 395 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 MIR4308-201ENST00000580634 81 ntBASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.73□□□□□ -1.97
TRIM55Q9BYV6 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms