Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 RNU6-1186P-201ENST00000410429 97 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RNU6-1199P-201ENST00000411249 104 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 ELOCP20-201ENST00000422460 345 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 MTND2P23-201ENST00000422990 651 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RPL23AP6-201ENST00000446637 472 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 LINC01399-202ENST00000458450 244 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RNA5SP233-201ENST00000459153 113 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RNA5SP57-201ENST00000459463 123 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 RPS26P45-201ENST00000471748 340 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 AL117187.1-201ENST00000555482 181 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 SNRPGP19-201ENST00000603826 189 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 snoU13.31-201ENST00000607291 104 ntBASIC2.38□□□□□ -2.03
RTFDC1Q9BY42 SNORD81.1-201ENST00000363064 77 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.149-201ENST00000363558 117 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.226-201ENST00000364337 114 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 SNORA16B-201ENST00000364674 135 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU6-505P-201ENST00000384427 107 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU4-30P-201ENST00000410245 143 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU2-7P-201ENST00000410794 178 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU2-61P-201ENST00000411069 191 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 AC244636.1-201ENST00000421152 228 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RPL23AP3-201ENST00000453844 468 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RPL23AP63-201ENST00000498752 471 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU6-436P-201ENST00000516171 114 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 AP003733.2-201ENST00000529409 171 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 AC127459.3-201ENST00000624328 466 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
RTFDC1Q9BY42 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 MIRLET7G-201ENST00000362280 84 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 RNU6-290P-201ENST00000365212 101 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 RNU6-376P-201ENST00000384731 106 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 RNA5SP467-201ENST00000391274 118 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.602-201ENST00000410535 92 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC009310.1-201ENST00000414414 451 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC010409.1-201ENST00000487382 476 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 RNU6-496P-201ENST00000516145 99 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 RNU6-635P-201ENST00000516651 102 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC084364.2-201ENST00000546924 395 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AL773524.1-201ENST00000614065 229 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 AC005336.3-201ENST00000623833 2679 ntBASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
RTFDC1Q9BY42 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 RNA5SP276-201ENST00000362580 94 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 RNU6-457P-201ENST00000363999 107 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.383-201ENST00000383855 97 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 MIR1302-3-201ENST00000408128 138 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 AL445685.2-201ENST00000422551 342 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 HMGN2P38-201ENST00000423806 265 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 FTH1P12-201ENST00000432137 551 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 AL118496.2-201ENST00000448300 230 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 AC090255.1-201ENST00000495779 349 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 MIR4255-201ENST00000579351 72 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.35□□□□□ -2.03
RTFDC1Q9BY42 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.222-201ENST00000364264 102 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.329-201ENST00000365209 107 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 RNU6-514P-201ENST00000384208 107 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 Y_RNA.574-201ENST00000384766 95 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 MIR520G-201ENST00000385064 90 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 MIR9-3-201ENST00000385084 90 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 MIR548F4-201ENST00000408515 105 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 AC003989.2-201ENST00000440224 169 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 RPL36AP21-201ENST00000490372 323 ntBASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.34□□□□□ -2.03
RTFDC1Q9BY42 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.04
RTFDC1Q9BY42 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 RNU6-112P-201ENST00000363599 104 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 SNORA63D-201ENST00000364359 132 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 RNA5SP160-201ENST00000364866 120 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 RNA5SP190-201ENST00000365222 118 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.569-201ENST00000384749 103 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 RNA5SP100-201ENST00000410903 110 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 RNA5SP59-201ENST00000410922 110 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 AC245047.4-201ENST00000433189 144 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 AL163195.1-201ENST00000496941 348 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 MIR4781-201ENST00000585250 76 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
RTFDC1Q9BY42 AC018630.2-201ENST00000534866 2403 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.124-201ENST00000363339 93 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 Y_RNA.136-201ENST00000363444 102 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 DYNLT3P2-201ENST00000442517 295 ntBASIC2.32□□□□□ -2.04
RTFDC1Q9BY42 U8.19-201ENST00000459095 133 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms