Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR548AD-201ENST00000584780 82 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 SNORD11B-201ENST00000607707 90 ntBASIC-1.1□□□□□ -2.59
SCAPERQ9BY12 RNA5SP494-201ENST00000410653 129 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 AC010424.1-201ENST00000506336 297 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 AC091885.1-201ENST00000506658 268 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 RNU6-504P-201ENST00000516568 104 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 MIR3165-201ENST00000579874 75 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 AC010608.3-201ENST00000625048 527 ntBASIC-1.11□□□□□ -2.59
SCAPERQ9BY12 MIR148A-201ENST00000362215 68 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 RNU6-873P-201ENST00000363833 107 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 MIR501-201ENST00000390204 84 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 RPL21P38-201ENST00000418090 167 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 RNU6-323P-201ENST00000521915 107 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 HIF1AP1-201ENST00000553642 175 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 MIR3118-1-201ENST00000581787 76 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 AC091948.2-201ENST00000636510 279 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 AC099786.3-201ENST00000565735 1410 ntBASIC-1.12□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 RNU6-723P-201ENST00000383973 107 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 AL365184.2-201ENST00000431139 435 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 SCARNA18-201ENST00000459004 134 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 AC010598.1-201ENST00000510378 103 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 SNORA27.4-201ENST00000516650 95 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 RNU6-1003P-201ENST00000517099 105 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 MIR4752-201ENST00000579672 72 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 MIR548AR-201ENST00000582191 57 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 RNU1-29P-201ENST00000606574 126 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 AL590491.3-201ENST00000610731 82 ntBASIC-1.13□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 SNORD68-201ENST00000363214 84 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 RNU5E-10P-201ENST00000363506 118 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 RNU6-1322P-201ENST00000364309 107 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 RNU6-298P-201ENST00000390888 96 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 MIR1207-201ENST00000408249 87 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 RNU5A-5P-201ENST00000411054 116 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 AC137499.1-201ENST00000427602 88 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 AC046134.1-201ENST00000514454 666 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.666-201ENST00000516187 112 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 SCARNA4-201ENST00000629045 128 ntBASIC-1.14□□□□□ -2.59
SCAPERQ9BY12 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 MIR18B-201ENST00000454574 71 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC005178.1-201ENST00000508392 440 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 RNA5SP47-201ENST00000517230 109 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC125232.2-201ENST00000592457 143 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC131235.4-201ENST00000609288 620 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 U4.2-201ENST00000618561 85 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC022306.3-201ENST00000619930 550 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AL445984.1-201ENST00000637834 659 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC006927.2-201ENST00000639256 389 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 MIR655-201ENST00000362159 97 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 RNU5B-4P-201ENST00000363508 111 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 RNU6-811P-201ENST00000384069 107 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.498-201ENST00000384460 102 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AL390729.2-201ENST00000416137 156 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC018448.1-201ENST00000552843 316 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC090617.3-201ENST00000573670 475 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 MIR3925-201ENST00000584674 77 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC121247.2-201ENST00000604776 136 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 uc_338.4-201ENST00000616635 176 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 AC139792.3-201ENST00000623525 224 ntBASIC-1.15□□□□□ -2.59
SCAPERQ9BY12 SNORA75.1-201ENST00000391130 148 ntBASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AC006380.1-201ENST00000603598 186 ntBASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AC018462.2-201ENST00000605375 395 ntBASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AL139418.1-201ENST00000613613 177 ntBASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 AC019226.2-201ENST00000625973 424 ntBASIC-1.16□□□□□ -2.6
SCAPERQ9BY12 MIR365A-201ENST00000362260 87 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-1048P-201ENST00000364054 107 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNA5SP192-201ENST00000364404 120 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-116P-201ENST00000384042 109 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-125P-201ENST00000384505 107 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-376P-201ENST00000384731 106 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 MTND4P3-201ENST00000417829 541 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 AC092447.3-201ENST00000426027 686 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 AC119618.1-201ENST00000434191 222 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 SNORA18.4-201ENST00000516440 124 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 RNU6-135P-201ENST00000516769 101 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 MIR4762-201ENST00000585261 75 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 AF250324.2-201ENST00000608299 610 ntBASIC-1.17□□□□□ -2.6
SCAPERQ9BY12 U7.6-201ENST00000610841 64 ntBASIC-1.17□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms