Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP005660.1-201ENST00000522972 293 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AC040926.1-201ENST00000530195 238 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 MIR4680-201ENST00000580906 66 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AL157834.3-201ENST00000615543 103 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 AL078596.1-201ENST00000624856 447 ntBASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RSPO3Q9BXY4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU1-58P-201ENST00000362413 163 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.101-201ENST00000363154 102 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.105-201ENST00000363182 111 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-626P-201ENST00000363354 107 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.158-201ENST00000363651 101 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 SNORA33-201ENST00000363664 130 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 U3.8-201ENST00000363675 217 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.202-201ENST00000364083 110 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 SNORA63C-201ENST00000364578 129 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 SNORD14.1-201ENST00000365609 90 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-20P-201ENST00000384106 107 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.498-201ENST00000384460 102 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU11-3P-201ENST00000391111 133 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1199P-201ENST00000411249 104 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RAB28P5-201ENST00000427490 651 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC015922.2-201ENST00000435593 184 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RPEP5-201ENST00000441137 268 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC245102.2-201ENST00000448956 180 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 NDUFB4P10-201ENST00000452541 359 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU1-131P-201ENST00000458943 161 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-475P-201ENST00000516073 104 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1041P-201ENST00000516254 102 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNVU1-2-201ENST00000516326 135 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RNU6-107P-201ENST00000516643 102 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AL078603.1-201ENST00000603824 313 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC004467.1-201ENST00000615678 330 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AC010205.1-201ENST00000616668 449 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 RMST_2.1-201ENST00000617263 136 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 U1.36-201ENST00000620684 176 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 snoZ196.1-201ENST00000625269 89 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.14□□□□□ -2.23
RSPO3Q9BXY4 AL159152.1-201ENST00000635019 2587 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 MIR410-201ENST00000362222 80 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.26-201ENST00000362539 101 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.153-201ENST00000363615 91 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.287-201ENST00000364853 94 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1235P-201ENST00000384559 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-160P-201ENST00000384591 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1011P-201ENST00000384668 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 MIR628-201ENST00000385229 95 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 SNORD78.2-201ENST00000391076 69 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 MRPL35P1-201ENST00000404272 572 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AL355796.1-201ENST00000406706 323 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNA5SP501-201ENST00000410990 112 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 MTCO3P19-201ENST00000415864 321 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-625P-201ENST00000459412 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-498P-201ENST00000459468 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC093852.1-201ENST00000503587 266 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC074133.1-201ENST00000515696 183 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 SCARNA15.1-201ENST00000516384 125 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1046P-201ENST00000516538 107 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC136932.1-201ENST00000574771 208 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC124312.5-201ENST00000604451 268 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 RAC1P9-201ENST00000604990 392 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC006001.4-201ENST00000622243 395 ntBASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.13□□□□□ -2.23
RSPO3Q9BXY4 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-862P-201ENST00000362804 105 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-23P-201ENST00000363283 107 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.143-201ENST00000363520 106 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU5F-3P-201ENST00000363767 117 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-806P-201ENST00000365147 105 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-1264P-201ENST00000383891 107 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.389-201ENST00000383924 113 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.471-201ENST00000384312 102 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 MIR7-2-201ENST00000384970 110 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-985P-201ENST00000410182 104 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-121P-201ENST00000410525 99 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 ELOCP20-201ENST00000422460 345 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 HMGN2P34-201ENST00000437647 269 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 FCF1P4-201ENST00000448326 183 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 SNORD65B-201ENST00000459126 73 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC011406.1-201ENST00000512440 370 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 RNU6-397P-201ENST00000516226 104 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 Y_RNA.715-201ENST00000517082 110 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 CYCSP23-201ENST00000519781 313 ntBASIC1.12□□□□□ -2.23
RSPO3Q9BXY4 AC023442.1-201ENST00000531247 422 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms