Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNU1-22P-201ENST00000363334 158 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.145-201ENST00000363527 102 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.331-201ENST00000365267 102 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 EBAG9P1-201ENST00000418955 543 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 HSPE1P13-201ENST00000451143 297 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 RPS26P55-201ENST00000471178 356 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 AC097462.1-201ENST00000514125 324 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 RNU7-110P-201ENST00000516891 62 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 RNU7-128P-201ENST00000517247 62 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 AC008269.2-201ENST00000561915 1105 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 AC136932.1-201ENST00000574771 208 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 MIR4300-201ENST00000581016 96 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 MIR8081-201ENST00000611533 95 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 MIR376A1-201ENST00000616574 68 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 U6.108-201ENST00000637764 58 ntBASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CCDC28BQ9BUN5 U8.2-201ENST00000363156 134 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-770P-201ENST00000363929 105 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.210-201ENST00000364161 110 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.214-201ENST00000364201 112 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 SNORA63C-201ENST00000364578 129 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-407P-201ENST00000365280 104 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-738P-201ENST00000384531 106 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-296P-201ENST00000384608 107 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-21P-201ENST00000384710 107 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 MIR150-201ENST00000385048 84 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-710P-201ENST00000410424 105 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU2-61P-201ENST00000411069 191 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC015922.2-201ENST00000435593 184 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU7-94P-201ENST00000459576 63 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC010655.3-201ENST00000478818 450 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC010409.1-201ENST00000487382 476 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-1278P-201ENST00000516130 107 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-436P-201ENST00000516171 114 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-397P-201ENST00000516226 104 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-1046P-201ENST00000516538 107 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 RNA5SP481-201ENST00000516814 122 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.720-201ENST00000517166 92 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC023157.2-201ENST00000540596 141 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC116312.1-201ENST00000606841 314 ntBASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.44□□□□□ -2.18
CCDC28BQ9BUN5 AL161722.3-201ENST00000605789 2983 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 SNORA33-201ENST00000363664 130 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-324P-201ENST00000363957 106 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-338P-201ENST00000383888 105 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 MIR562-201ENST00000384894 95 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RPL21P1-201ENST00000399532 476 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-1186P-201ENST00000410429 97 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AC113618.1-201ENST00000416747 285 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AL731563.1-201ENST00000442202 214 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RNA5SP57-201ENST00000459463 123 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AL163195.1-201ENST00000496941 348 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 MRPS35P2-201ENST00000508242 191 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 RNU7-172P-201ENST00000517125 64 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AC027419.1-201ENST00000522976 328 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AC007742.2-201ENST00000618226 398 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 AC127459.3-201ENST00000624328 466 ntBASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CCDC28BQ9BUN5 SNORD114-1-201ENST00000362705 72 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.124-201ENST00000363339 93 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 SNORD113-8-201ENST00000363497 74 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.222-201ENST00000364264 102 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-117P-201ENST00000365415 107 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-505P-201ENST00000384427 107 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-950P-201ENST00000384651 107 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 U8.13-201ENST00000390842 128 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.581-201ENST00000391017 97 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 AL627390.1-201ENST00000396055 340 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 ELOCP20-201ENST00000422460 345 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 AC024067.1-201ENST00000426199 223 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 TRBV12-1-201ENST00000479785 344 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RPS29P21-201ENST00000496272 170 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RNA5SP61-201ENST00000516453 100 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RNU6-966P-201ENST00000516479 104 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 SNORA44.1-201ENST00000517031 108 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 RPL21P9-201ENST00000556149 474 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 PRR13P7-201ENST00000605538 430 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
CCDC28BQ9BUN5 Y_RNA.19-201ENST00000362462 99 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 RNU4-90P-201ENST00000362773 141 ntBASIC1.41□□□□□ -2.18
CCDC28BQ9BUN5 SNORD81.1-201ENST00000363064 77 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 505.7 ms