Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 WWP1P1-201ENST00000466609 2769 ntBASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.68□□□□□ -1.98
LRFN3Q9BTN0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1290P-201ENST00000362957 109 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.215-201ENST00000364204 112 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 SNORA25.9-201ENST00000365087 128 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.357-201ENST00000365487 109 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1264P-201ENST00000383891 107 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU1-109P-201ENST00000383960 147 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 SNORA67.2-201ENST00000384300 149 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1072P-201ENST00000384703 107 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-443P-201ENST00000384780 107 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 SNORA26.7-201ENST00000391288 122 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 AC123900.1-201ENST00000420390 96 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 TOMM22P2-201ENST00000430735 237 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 AC005840.1-201ENST00000498412 377 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 AC093259.1-201ENST00000509755 300 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-479P-201ENST00000516348 105 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-948P-201ENST00000516374 107 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 SNORD116-25-201ENST00000516517 92 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-62P-201ENST00000516526 102 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 RNU6-107P-201ENST00000516643 102 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 MIR3126-201ENST00000577443 74 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 MIR3684-201ENST00000579779 74 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 AC006380.1-201ENST00000603598 186 ntBASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.67□□□□□ -1.98
LRFN3Q9BTN0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 RNU6-801P-201ENST00000364087 105 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 RNU6-1154P-201ENST00000391001 104 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 Y_RNA.586-201ENST00000391146 98 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AL135790.2-201ENST00000437701 267 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 RPS12P2-201ENST00000439728 269 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 HMGN2P9-201ENST00000476875 229 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 ATP5EP1-201ENST00000510257 156 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AC100767.1-201ENST00000528178 123 ntBASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
LRFN3Q9BTN0 AC068700.1-201ENST00000565862 3754 ntBASIC2.65□□□□□ -1.98
LRFN3Q9BTN0 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
LRFN3Q9BTN0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
LRFN3Q9BTN0 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.65□□□□□ -1.98
LRFN3Q9BTN0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.99-201ENST00000363138 105 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-324P-201ENST00000363957 106 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-151P-201ENST00000364158 107 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.332-201ENST00000365271 113 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 SNORA22C-201ENST00000384614 134 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-417P-201ENST00000384712 107 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-381P-201ENST00000391259 108 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP274-201ENST00000410484 108 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-735P-201ENST00000410612 107 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RPL32P35-201ENST00000415214 394 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 RNU6-426P-201ENST00000516464 97 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 snoU13.31-201ENST00000607291 104 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 AL078604.3-201ENST00000615580 211 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.778-201ENST00000620203 90 ntBASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
LRFN3Q9BTN0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 SNORD87-201ENST00000364849 89 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNU6-275P-201ENST00000364910 107 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNU6-975P-201ENST00000384296 105 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 MIR518C-201ENST00000384822 101 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 SNORA26.5-201ENST00000391215 123 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RPL21P3-201ENST00000395517 478 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RPS20P10-201ENST00000451209 253 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 SNORA4.4-201ENST00000515921 135 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP217-201ENST00000515959 91 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 Y_RNA.797-201ENST00000515977 94 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP272-201ENST00000516095 111 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 RNU6-313P-201ENST00000516317 112 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 AC136628.3-201ENST00000521868 290 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 AL365222.1-201ENST00000614661 98 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 AC073476.4-201ENST00000628409 72 ntBASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
LRFN3Q9BTN0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 SNORD115-30-201ENST00000364117 82 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 SNORA80E-201ENST00000384744 137 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 MIR569-201ENST00000385228 96 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 MIR29C-201ENST00000385231 88 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 RNU6-1168P-201ENST00000390831 104 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 RNU6-239P-201ENST00000390990 99 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 RNA5SP504-201ENST00000410676 117 ntBASIC2.63□□□□□ -1.99
LRFN3Q9BTN0 AL357134.1-201ENST00000445848 426 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms