Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AC006157.1-201ENST00000611750 366 ntBASIC1.99□□□□□ -2.09
HERPUD2Q9BSE4 U6.115-201ENST00000636045 103 ntBASIC1.99□□□□□ -2.09
HERPUD2Q9BSE4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.39-201ENST00000362620 98 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.222-201ENST00000364264 102 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-450P-201ENST00000364654 107 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.307-201ENST00000365022 117 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.455-201ENST00000384230 98 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 MT-TW-201ENST00000387382 68 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC010154.1-201ENST00000425857 269 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC003989.2-201ENST00000440224 169 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 HSPE1P24-201ENST00000450782 238 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC005908.1-201ENST00000468701 347 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 RNU7-172P-201ENST00000517125 64 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AP002001.1-203ENST00000534002 267 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC006380.1-201ENST00000603598 186 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AC004467.1-201ENST00000615678 330 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 AL138825.1-201ENST00000618587 192 ntBASIC1.98□□□□□ -2.09
HERPUD2Q9BSE4 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.27-201ENST00000362540 103 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-961P-201ENST00000363893 105 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 Y_RNA.188-201ENST00000363952 111 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-454P-201ENST00000364292 107 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-702P-201ENST00000364982 107 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-806P-201ENST00000365147 105 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AC019129.1-201ENST00000403786 261 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RN7SKP200-201ENST00000410564 320 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AC245047.3-201ENST00000429428 127 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AC097462.1-201ENST00000514125 324 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-635P-201ENST00000516651 102 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU6-1271P-201ENST00000517049 105 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 RNU7-128P-201ENST00000517247 62 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AC092447.9-201ENST00000603395 144 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 AC073413.2-201ENST00000604332 360 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 PRR13P7-201ENST00000605538 430 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 MIR8063-201ENST00000621930 81 ntBASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HERPUD2Q9BSE4 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 ICE2P2-201ENST00000483823 2787 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 SNORA27.1-201ENST00000362604 124 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-238P-201ENST00000363313 106 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.149-201ENST00000363558 117 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.214-201ENST00000364201 112 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU1-115P-201ENST00000365329 160 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AC117470.1-201ENST00000381974 330 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AL606517.2-201ENST00000442855 241 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-1012P-201ENST00000516606 109 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-388P-201ENST00000517012 105 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-389P-201ENST00000517048 105 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AC023442.1-201ENST00000531247 422 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 SNORA77B-201ENST00000578179 125 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 MIR4659A-201ENST00000580269 81 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AC022217.4-201ENST00000604389 163 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 AL365434.2-201ENST00000607979 234 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 MIR7843-201ENST00000622274 79 ntBASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HERPUD2Q9BSE4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 ZNF72P-201ENST00000425869 1908 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AC005592.1-201ENST00000566527 1640 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AC018630.2-201ENST00000534866 2403 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.105-201ENST00000363182 111 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 RNU1-22P-201ENST00000363334 158 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.176-201ENST00000363815 109 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MIR873-201ENST00000401120 77 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MIR1289-2-201ENST00000408360 111 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 ELOCP20-201ENST00000422460 345 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 SUMO1P3-201ENST00000439961 304 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 RPS27P1-201ENST00000450552 247 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 RNA5SP364-201ENST00000516938 78 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AC005176.2-201ENST00000596933 147 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AL929325.1-201ENST00000603096 117 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AL021879.1-201ENST00000611756 288 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 AC078938.1-201ENST00000620993 318 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MIR4272-201ENST00000635924 64 ntBASIC1.95□□□□□ -2.1
HERPUD2Q9BSE4 MIR126-201ENST00000362291 85 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 Y_RNA.447-201ENST00000384184 113 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-376P-201ENST00000384731 106 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 MRPL35P1-201ENST00000404272 572 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 RNU2-64P-201ENST00000411315 191 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 MRPS35P2-201ENST00000508242 191 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 RNU6-1278P-201ENST00000516130 107 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 MIR4285-201ENST00000581001 85 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 AC005357.1-201ENST00000588399 301 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 RPS29P30-201ENST00000600975 111 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 AC062037.2-201ENST00000610137 73 ntBASIC1.94□□□□□ -2.1
HERPUD2Q9BSE4 MIR8054-201ENST00000620877 86 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 198 ms