Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
SMOQ99835 Y_RNA.262-201ENST00000364641 102 ntBASIC2.4□□□□□ -2.03
SMOQ99835 RNU6-117P-201ENST00000365415 107 ntBASIC2.4□□□□□ -2.03
SMOQ99835 RNU6-493P-201ENST00000391321 108 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AC007064.1-201ENST00000412238 351 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
SMOQ99835 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.4□□□□□ -2.03
SMOQ99835 AC104332.1-201ENST00000440471 797 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.4□□□□□ -2.03
SMOQ99835 RNU7-141P-201ENST00000459304 62 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AC022559.1-201ENST00000520905 205 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AP005660.1-201ENST00000522972 293 ntBASIC2.4□□□□□ -2.03
SMOQ99835 CYCSP26-201ENST00000534107 320 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AP002392.1-201ENST00000537692 208 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR5692C2-201ENST00000577959 77 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR4308-201ENST00000580634 81 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR4769-201ENST00000584126 77 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR4658-201ENST00000584344 65 ntBASIC2.4□□□□□ -2.03
SMOQ99835 AC004832.4-201ENST00000608952 331 ntBASIC2.4□□□□□ -2.03
SMOQ99835 FTX_2.1-201ENST00000618816 94 ntBASIC2.4□□□□□ -2.03
SMOQ99835 MIR6766-201ENST00000622641 72 ntBASIC2.4□□□□□ -2.03
SMOQ99835 Y_RNA.150-201ENST00000363562 102 ntBASIC2.39□□□□□ -2.03
SMOQ99835 RNU6-209P-201ENST00000384118 107 ntBASIC2.39□□□□□ -2.03
SMOQ99835 RNU1-148P-201ENST00000384472 162 ntBASIC2.39□□□□□ -2.03
SMOQ99835 RNU6-918P-201ENST00000391219 106 ntBASIC2.39□□□□□ -2.03
SMOQ99835 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.39□□□□□ -2.03
SMOQ99835 AC011406.1-201ENST00000512440 370 ntBASIC2.39□□□□□ -2.03
SMOQ99835 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SMOQ99835 MIR5194-201ENST00000582634 120 ntBASIC2.39□□□□□ -2.03
SMOQ99835 AC068647.2-201ENST00000637380 353 ntBASIC2.39□□□□□ -2.03
SMOQ99835 CENPCP1-201ENST00000533085 2578 ntBASIC2.39□□□□□ -2.03
SMOQ99835 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.38□□□□□ -2.03
SMOQ99835 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
SMOQ99835 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMOQ99835 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMOQ99835 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SMOQ99835 RNU6-1020P-201ENST00000363684 107 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU6-899P-201ENST00000363947 107 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU4-10P-201ENST00000364383 140 ntBASIC2.38□□□□□ -2.03
SMOQ99835 SNORA67.1-201ENST00000364749 141 ntBASIC2.38□□□□□ -2.03
SMOQ99835 U8.7-201ENST00000364940 136 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU6-417P-201ENST00000384712 107 ntBASIC2.38□□□□□ -2.03
SMOQ99835 MIR221-201ENST00000385135 110 ntBASIC2.38□□□□□ -2.03
SMOQ99835 MIR1253-201ENST00000408273 105 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.38□□□□□ -2.03
SMOQ99835 EDDM3CP-201ENST00000415977 425 ntBASIC2.38□□□□□ -2.03
SMOQ99835 HMGN2P34-201ENST00000437647 269 ntBASIC2.38□□□□□ -2.03
SMOQ99835 HSPE1P21-201ENST00000438283 308 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU7-120P-201ENST00000459334 63 ntBASIC2.38□□□□□ -2.03
SMOQ99835 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.38□□□□□ -2.03
SMOQ99835 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.38□□□□□ -2.03
SMOQ99835 RNU1-41P-201ENST00000516161 162 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU6-1041P-201ENST00000516254 102 ntBASIC2.38□□□□□ -2.03
SMOQ99835 RNU1-48P-201ENST00000516400 162 ntBASIC2.38□□□□□ -2.03
SMOQ99835 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.38□□□□□ -2.03
SMOQ99835 AC100767.1-201ENST00000528178 123 ntBASIC2.38□□□□□ -2.03
SMOQ99835 MIR4438-201ENST00000585271 93 ntBASIC2.38□□□□□ -2.03
SMOQ99835 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SMOQ99835 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SMOQ99835 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMOQ99835 RNU1-22P-201ENST00000363334 158 ntBASIC2.37□□□□□ -2.03
SMOQ99835 RNU6-1164P-201ENST00000364428 107 ntBASIC2.37□□□□□ -2.03
SMOQ99835 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.37□□□□□ -2.03
SMOQ99835 RNU6-160P-201ENST00000384591 107 ntBASIC2.37□□□□□ -2.03
SMOQ99835 AL355497.1-201ENST00000406262 551 ntBASIC2.37□□□□□ -2.03
SMOQ99835 RNA5SP181-201ENST00000410246 98 ntBASIC2.37□□□□□ -2.03
SMOQ99835 RNA5SP511-201ENST00000410487 115 ntBASIC2.37□□□□□ -2.03
SMOQ99835 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
SMOQ99835 COX6CP10-201ENST00000416832 224 ntBASIC2.37□□□□□ -2.03
SMOQ99835 AC117454.1-201ENST00000491120 168 ntBASIC2.37□□□□□ -2.03
SMOQ99835 AC097462.1-201ENST00000514125 324 ntBASIC2.37□□□□□ -2.03
SMOQ99835 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.37□□□□□ -2.03
SMOQ99835 SUMO2P18-201ENST00000518873 252 ntBASIC2.37□□□□□ -2.03
SMOQ99835 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.37□□□□□ -2.03
SMOQ99835 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.37□□□□□ -2.03
SMOQ99835 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.37□□□□□ -2.03
SMOQ99835 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SMOQ99835 snoU2-30.2-201ENST00000362805 70 ntBASIC2.36□□□□□ -2.03
SMOQ99835 SNORD115-3-201ENST00000363100 82 ntBASIC2.36□□□□□ -2.03
SMOQ99835 RNU1-91P-201ENST00000364746 163 ntBASIC2.36□□□□□ -2.03
SMOQ99835 Y_RNA.555-201ENST00000384673 110 ntBASIC2.36□□□□□ -2.03
SMOQ99835 AL356320.1-201ENST00000429616 163 ntBASIC2.36□□□□□ -2.03
SMOQ99835 AL353689.1-201ENST00000438895 199 ntBASIC2.36□□□□□ -2.03
SMOQ99835 RNU1-131P-201ENST00000458943 161 ntBASIC2.36□□□□□ -2.03
SMOQ99835 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.36□□□□□ -2.03
SMOQ99835 RNU7-115P-201ENST00000516433 55 ntBASIC2.36□□□□□ -2.03
SMOQ99835 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.36□□□□□ -2.03
SMOQ99835 AL137100.2-201ENST00000555786 315 ntBASIC2.36□□□□□ -2.03
SMOQ99835 AC015720.1-201ENST00000565251 277 ntBASIC2.36□□□□□ -2.03
SMOQ99835 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.36□□□□□ -2.03
SMOQ99835 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.36□□□□□ -2.03
SMOQ99835 MIR548AY-201ENST00000617669 107 ntBASIC2.36□□□□□ -2.03
SMOQ99835 U6.73-201ENST00000619194 103 ntBASIC2.36□□□□□ -2.03
SMOQ99835 MIR338-201ENST00000636369 67 ntBASIC2.36□□□□□ -2.03
SMOQ99835 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
SMOQ99835 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
SMOQ99835 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMOQ99835 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SMOQ99835 SNORA33-201ENST00000363664 130 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 384.4 ms