Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.27□□□□□ -2.21
RAB40CQ96S21 RPL30P7-201ENST00000479312 323 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 RNU6-1291P-201ENST00000516591 104 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 SUMO2P16-201ENST00000519475 264 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 MIR8081-201ENST00000611533 95 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 AL513423.1-201ENST00000621695 132 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 AL008636.1-201ENST00000625038 1018 ntBASIC1.27□□□□□ -2.21
RAB40CQ96S21 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU1-42P-201ENST00000364033 160 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 Y_RNA.230-201ENST00000364348 109 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU6-505P-201ENST00000384427 107 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 MIR520G-201ENST00000385064 90 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 MIR320A-201ENST00000385302 82 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AL031003.1-201ENST00000404229 172 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 MIR1289-2-201ENST00000408360 111 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 SNX2P2-201ENST00000424553 323 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AL591806.2-201ENST00000433122 173 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU6-155P-201ENST00000516347 100 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 SNORA25.15-201ENST00000516487 89 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU6-63P-201ENST00000516690 95 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU4-77P-201ENST00000516692 156 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 RNU6-250P-201ENST00000516958 103 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AP002004.2-201ENST00000531656 154 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 MIR5188-201ENST00000583467 113 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AL117336.2-201ENST00000602435 335 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 MIR502-201ENST00000606349 86 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AL133255.1-201ENST00000606374 441 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 SNORD3E-202ENST00000627253 216 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 AL606534.2-204ENST00000635008 178 ntBASIC1.26□□□□□ -2.21
RAB40CQ96S21 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RAB40CQ96S21 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RAB40CQ96S21 SNORA1B-201ENST00000362535 133 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 RNU6-324P-201ENST00000363957 106 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 Y_RNA.197-201ENST00000364004 102 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 Y_RNA.446-201ENST00000384178 104 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 RNU6-136P-201ENST00000384663 107 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 AL160004.2-201ENST00000432935 350 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 RNU6-1337P-201ENST00000516525 95 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 SNORA40.14-201ENST00000516543 86 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 RNU6-1096P-201ENST00000517089 102 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 RPS29P30-201ENST00000600975 111 ntBASIC1.25□□□□□ -2.21
RAB40CQ96S21 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RAB40CQ96S21 MIR660-201ENST00000385235 97 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 RNU6-482P-201ENST00000391068 107 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 RNU5A-5P-201ENST00000411054 116 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AC233266.1-201ENST00000454518 96 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 RNU6-1170P-201ENST00000515974 106 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AC015712.3-201ENST00000559380 164 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.24□□□□□ -2.21
RAB40CQ96S21 MIR4255-201ENST00000579351 72 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AL080274.1-201ENST00000605565 220 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 SNORD58B-201ENST00000607313 66 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AC006157.1-201ENST00000611750 366 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AC242852.1-201ENST00000612151 96 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 AC244015.1-201ENST00000622301 99 ntBASIC1.24□□□□□ -2.21
RAB40CQ96S21 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
RAB40CQ96S21 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.23□□□□□ -2.21
RAB40CQ96S21 MIR26B-201ENST00000362251 77 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNU6-1175P-201ENST00000365200 107 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNY1P14-201ENST00000384426 108 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 AL627390.1-201ENST00000396055 340 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 MIR1304-201ENST00000408243 91 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNU6-1199P-201ENST00000411249 104 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.23□□□□□ -2.21
RAB40CQ96S21 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
RAB40CQ96S21 HSPE1P13-201ENST00000451143 297 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 AL163540.1-201ENST00000485382 386 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 OR9P1P-201ENST00000496431 281 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNU6-237P-201ENST00000515985 71 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNU6-966P-201ENST00000516479 104 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RNU7-28P-201ENST00000516759 62 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 RN7SKP295-201ENST00000517264 153 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 AC022441.3-201ENST00000605737 136 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 BX248123.2-201ENST00000606318 124 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 Y_RNA.772-201ENST00000606692 102 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 AC010205.1-201ENST00000616668 449 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 AL353997.5-201ENST00000618886 171 ntBASIC1.23□□□□□ -2.21
RAB40CQ96S21 Y_RNA.80-201ENST00000362996 102 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 Y_RNA.419-201ENST00000384041 102 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 Y_RNA.431-201ENST00000384086 102 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 RNU6-424P-201ENST00000384367 105 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 Y_RNA.485-201ENST00000384395 102 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 Y_RNA.570-201ENST00000384750 101 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 RNA5SP482-201ENST00000391269 118 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 RNA5SP511-201ENST00000410487 115 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AL354751.2-201ENST00000415471 210 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 CYCSP49-201ENST00000420810 319 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 MTND1P14-201ENST00000427400 950 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 CALM2P4-201ENST00000430810 426 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AL162725.1-201ENST00000435405 301 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AL049830.1-201ENST00000468034 425 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.22□□□□□ -2.21
RAB40CQ96S21 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.22□□□□□ -2.21
RAB40CQ96S21 RNU6-436P-201ENST00000516171 114 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 RNA5SP168-201ENST00000516642 112 ntBASIC1.22□□□□□ -2.21
RAB40CQ96S21 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 186 ms