Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 RPL7P42-201ENST00000481005 679 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 RNU7-156P-201ENST00000517214 74 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 AL117336.2-201ENST00000602435 335 ntBASIC-2.3□□□□□ -2.78
VPS13AQ96RL7 RNU6-973P-201ENST00000364690 107 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 Y_RNA.376-201ENST00000365638 108 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 MTCO3P41-201ENST00000414801 328 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 SNAP23P1-201ENST00000433229 246 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AC116655.1-201ENST00000508324 901 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 ELOCP20-201ENST00000422460 345 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNU6-175P-201ENST00000516896 107 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AP001372.4-201ENST00000524889 472 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AC097460.3-201ENST00000623099 442 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 SNORD115-25-201ENST00000362619 82 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNY4P10-201ENST00000365571 96 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNU6-354P-201ENST00000383862 107 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNU6-610P-201ENST00000384264 107 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNU2-51P-201ENST00000410708 197 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 MTND4LP10-201ENST00000435146 291 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 POLR2KP1-201ENST00000553226 168 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AL606834.3-201ENST00000602615 496 ntBASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-2.31□□□□□ -2.78
VPS13AQ96RL7 RNU2-8P-201ENST00000410727 190 ntBASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 MTATP6P14-201ENST00000455189 673 ntBASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 Y_RNA.597-201ENST00000410463 100 ntBASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 SNORD63.1-201ENST00000516178 80 ntBASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC-2.32□□□□□ -2.78
VPS13AQ96RL7 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 RNU6-1041P-201ENST00000516254 102 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 RNU6-841P-201ENST00000383872 107 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 AL138752.1-201ENST00000452964 351 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 AL353752.1-201ENST00000454946 260 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 RNU7-41P-201ENST00000515917 61 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 RN7SKP299-201ENST00000606679 301 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 Y_RNA.830-201ENST00000628531 96 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 MIR526A1-201ENST00000384897 85 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 MT-TN-201ENST00000387400 73 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 MTATP6P27-201ENST00000416987 621 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 Y_RNA.657-201ENST00000515983 102 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 AC126544.2-201ENST00000625174 749 ntBASIC-2.33□□□□□ -2.78
VPS13AQ96RL7 RNU4-24P-201ENST00000364565 139 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 RNU6-54P-201ENST00000365563 107 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 AC007919.1-201ENST00000429380 217 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 SNORA74.3-201ENST00000517108 154 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 AC023538.1-201ENST00000534576 736 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 AC108747.1-201ENST00000609508 535 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 RNU6-400P-201ENST00000391173 106 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 AC004217.3-201ENST00000551552 878 ntBASIC-2.34□□□□□ -2.78
VPS13AQ96RL7 MIR340-201ENST00000362125 95 ntBASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 BEND7P1-201ENST00000422058 457 ntBASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 MTCO3P38-201ENST00000468910 766 ntBASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 RNU6-720P-201ENST00000516363 108 ntBASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 SNORA40.17-201ENST00000517256 115 ntBASIC-2.35□□□□□ -2.78
VPS13AQ96RL7 SNORD45.3-201ENST00000363836 72 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 AC008134.1-201ENST00000420943 193 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 AL606517.1-201ENST00000446914 387 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 MTCO3P15-201ENST00000526563 574 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 MIR544B-201ENST00000582372 78 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 RNU6-1210P-201ENST00000363775 107 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 RNU6-535P-201ENST00000384722 107 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 MIR181A1-201ENST00000385026 110 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 RNA5SP290-201ENST00000517133 127 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 AC022022.2-201ENST00000602989 360 ntBASIC-2.35□□□□□ -2.79
VPS13AQ96RL7 MIR186-201ENST00000384988 86 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 VN1R83P-201ENST00000595685 445 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 AP000753.3-201ENST00000604083 169 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 MIR4251-201ENST00000635819 61 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 RNU6-778P-201ENST00000363269 103 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 MIR1257-201ENST00000408490 117 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 AC114491.1-201ENST00000416095 246 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 AC069431.2-201ENST00000604149 1099 ntBASIC-2.36□□□□□ -2.79
VPS13AQ96RL7 DLEU2_6.3-201ENST00000340052 136 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 SNORA1B-201ENST00000362535 133 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 SNORD41.1-201ENST00000391000 69 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 MTND1P27-201ENST00000451117 902 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 DLEU2_6.2-201ENST00000620994 136 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 MIR1185-2-201ENST00000408687 86 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 U8.19-201ENST00000459095 133 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 snoU13.2-201ENST00000459201 104 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 RNU6-1243P-201ENST00000364028 107 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 Y_RNA.372-201ENST00000365599 102 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 AF186996.7-201ENST00000492781 209 ntBASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-2.37□□□□□ -2.79
VPS13AQ96RL7 RNU6-1317P-201ENST00000364582 104 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 AC098592.1-201ENST00000419352 333 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 MTATP6P17-201ENST00000431030 672 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 MTND1P11-201ENST00000456661 876 ntBASIC-2.38□□□□□ -2.79
VPS13AQ96RL7 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC-2.38□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms