Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU6-1031P-201ENST00000384773 107 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AL023284.1-201ENST00000403956 276 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 RNU2-61P-201ENST00000411069 191 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 HSPE1P21-201ENST00000438283 308 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 HSPE1P24-201ENST00000450782 238 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AP002004.2-201ENST00000531656 154 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.72□□□□□ -2.13
NR1H4Q96RI1 SNORD113-5-201ENST00000607261 78 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 AL021879.1-201ENST00000611756 288 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 PART1_1.1-201ENST00000611761 217 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 MIR376A1-201ENST00000616574 68 ntBASIC1.72□□□□□ -2.13
NR1H4Q96RI1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.71□□□□□ -2.13
NR1H4Q96RI1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 RNU6-639P-201ENST00000384074 107 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 RNU6-130P-201ENST00000411112 103 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC233266.1-201ENST00000454518 96 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 RNU6-63P-201ENST00000516690 95 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 RNU7-28P-201ENST00000516759 62 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 SNRPGP19-201ENST00000603826 189 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC242852.1-201ENST00000612151 96 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 MIR8063-201ENST00000621930 81 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 AC244015.1-201ENST00000622301 99 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 ICE2P2-201ENST00000483823 2787 ntBASIC1.71□□□□□ -2.14
NR1H4Q96RI1 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
NR1H4Q96RI1 RNU6-136P-201ENST00000384663 107 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 SNORA64-201ENST00000384674 134 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 SNORA11.2-201ENST00000408318 127 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 RNU4-30P-201ENST00000410245 143 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 POLR2KP2-201ENST00000438155 177 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 MTCYBP6-201ENST00000441810 138 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 STAG3L5P-204ENST00000443759 179 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 AC005908.1-201ENST00000468701 347 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 SNORA31.10-201ENST00000516482 106 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 RNU6-897P-201ENST00000517135 105 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 AC091178.2-201ENST00000584401 117 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.7□□□□□ -2.14
NR1H4Q96RI1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RNU6-1123P-201ENST00000362347 106 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 Y_RNA.527-201ENST00000384573 102 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RNU6-855P-201ENST00000410395 104 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 AL162725.1-201ENST00000435405 301 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RNU6-966P-201ENST00000516479 104 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RNU6-1046P-201ENST00000516538 107 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RNU6-1153P-201ENST00000516760 105 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 AL358944.1-201ENST00000528537 144 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 SNORA77B-201ENST00000578179 125 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 MIR4680-201ENST00000580906 66 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 AL355297.3-201ENST00000604082 446 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 RAC1P9-201ENST00000604990 392 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 AC021506.2-201ENST00000612354 169 ntBASIC1.69□□□□□ -2.14
NR1H4Q96RI1 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.69□□□□□ -2.14
NR1H4Q96RI1 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
NR1H4Q96RI1 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NR1H4Q96RI1 SNORD33-201ENST00000362761 85 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 SNORA33.2-201ENST00000365413 134 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 RNU6-203P-201ENST00000384038 104 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 RNU6-1248P-201ENST00000391096 64 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 RNA5SP511-201ENST00000410487 115 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 AC004965.1-201ENST00000413033 213 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 Z98742.3-201ENST00000418637 326 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NR1H4Q96RI1 PGBD4P5-201ENST00000445958 426 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 AC015720.1-201ENST00000565251 277 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 MIR4300-201ENST00000581016 96 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 MIR4422-201ENST00000581938 83 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 AC073349.3-201ENST00000617616 186 ntBASIC1.68□□□□□ -2.14
NR1H4Q96RI1 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 SNORD113-8-201ENST00000363497 74 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 Y_RNA.422-201ENST00000384054 114 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 RNA5SP482-201ENST00000391269 118 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AL356320.1-201ENST00000429616 163 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AL049830.1-201ENST00000468034 425 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 RNU6-1143P-201ENST00000516125 104 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AC131281.1-201ENST00000522984 164 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AL442663.2-201ENST00000554385 511 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AC113195.1-201ENST00000579952 141 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 DEFB117-201ENST00000602356 141 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AL513423.1-201ENST00000621695 132 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
NR1H4Q96RI1 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NR1H4Q96RI1 SNORA1B-201ENST00000362535 133 ntBASIC1.66□□□□□ -2.14
NR1H4Q96RI1 RNU4-90P-201ENST00000362773 141 ntBASIC1.66□□□□□ -2.14
NR1H4Q96RI1 SNORA63-201ENST00000363450 132 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms