Protein–RNA interactions for Protein: Q96QV1

HHIP, Hedgehog-interacting protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHIPQ96QV1 RNU2-63P-201ENST00000410792 194 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AL513477.1-202ENST00000417061 214 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC107083.1-201ENST00000439643 279 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.26□□□□□ -1.89
HHIPQ96QV1 HMGN1P7-201ENST00000491722 313 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC008885.1-201ENST00000514930 301 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC104027.1-201ENST00000521887 300 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC007751.1-201ENST00000529260 376 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 MIR3124-201ENST00000582636 67 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC004832.5-201ENST00000608677 401 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC073476.4-201ENST00000628409 72 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC018630.2-201ENST00000534866 2403 ntBASIC3.26□□□□□ -1.89
HHIPQ96QV1 AC017071.1-201ENST00000564407 2204 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HHIPQ96QV1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HHIPQ96QV1 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.25□□□□□ -1.89
HHIPQ96QV1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HHIPQ96QV1 snoU2-30.2-201ENST00000362805 70 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 SNORD24-201ENST00000383884 75 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 SNORA22-201ENST00000383907 134 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 SNORD116-21-201ENST00000384507 92 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HHIPQ96QV1 RNA5SP293-201ENST00000410527 113 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 AL353689.1-201ENST00000438895 199 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.25□□□□□ -1.89
HHIPQ96QV1 MIR4679-2-201ENST00000578358 77 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 UBL5P2-201ENST00000583788 219 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 AC006023.1-201ENST00000603944 259 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 AC108081.1-201ENST00000604358 221 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 AL353149.1-201ENST00000610667 244 ntBASIC3.25□□□□□ -1.89
HHIPQ96QV1 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
HHIPQ96QV1 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
HHIPQ96QV1 Y_RNA.309-201ENST00000365046 111 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 AC060773.1-201ENST00000421698 310 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 AF228730.3-201ENST00000436691 102 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 HMGN2P34-201ENST00000437647 269 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 RPS29P12-201ENST00000460178 152 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 RPL23AP67-201ENST00000465341 474 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 RN7SL442P-201ENST00000473804 320 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 AC023141.11-201ENST00000508864 202 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 RN7SKP19-201ENST00000516016 252 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 SCARNA20.6-201ENST00000517251 106 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 AC073413.2-201ENST00000604332 360 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.24□□□□□ -1.89
HHIPQ96QV1 MIR7153-201ENST00000637758 57 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HHIPQ96QV1 AL391516.1-201ENST00000554380 2449 ntBASIC3.24□□□□□ -1.89
HHIPQ96QV1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
HHIPQ96QV1 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HHIPQ96QV1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.23□□□□□ -1.89
HHIPQ96QV1 MIR340-201ENST00000362125 95 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 RNU1-23P-201ENST00000363361 144 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 RNU6-743P-201ENST00000364151 106 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 RNU6-880P-201ENST00000384526 107 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 RNU2-48P-201ENST00000410694 191 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 Y_RNA.630-201ENST00000411370 108 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 AC011406.1-201ENST00000512440 370 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HHIPQ96QV1 RNU6-113P-201ENST00000516653 101 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 Y_RNA.714-201ENST00000517065 90 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.23□□□□□ -1.89
HHIPQ96QV1 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.23□□□□□ -1.89
HHIPQ96QV1 MIR2682-201ENST00000580305 110 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 MIR4672-201ENST00000583126 81 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 AL022345.2-201ENST00000606307 135 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 AL121890.5-201ENST00000620848 304 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 MIR4679-1-201ENST00000637619 75 ntBASIC3.23□□□□□ -1.89
HHIPQ96QV1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
HHIPQ96QV1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HHIPQ96QV1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.22□□□□□ -1.89
HHIPQ96QV1 RNU6-309P-201ENST00000364573 106 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 MIR561-201ENST00000385216 97 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.22□□□□□ -1.89
HHIPQ96QV1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.22□□□□□ -1.89
HHIPQ96QV1 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.22□□□□□ -1.89
HHIPQ96QV1 NDUFA4P2-201ENST00000489989 244 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 MRPS17P9-201ENST00000511924 393 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 RNU6-991P-201ENST00000516168 107 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 uc_338.1-201ENST00000612113 180 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 AL359075.3-201ENST00000613288 217 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.22□□□□□ -1.89
HHIPQ96QV1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HHIPQ96QV1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.22□□□□□ -1.89
HHIPQ96QV1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HHIPQ96QV1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HHIPQ96QV1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HHIPQ96QV1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.89
HHIPQ96QV1 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
HHIPQ96QV1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
HHIPQ96QV1 RNU6-888P-201ENST00000363010 101 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 Y_RNA.621-201ENST00000411065 96 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 Y_RNA.651-201ENST00000459380 103 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 RNU6-341P-201ENST00000516973 96 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 RPL12P50-201ENST00000603116 116 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
HHIPQ96QV1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms