Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 CYP3A137P-201ENST00000562436 69 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AC104260.1-201ENST00000616660 539 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 U6.115-201ENST00000636045 103 ntBASIC0.79□□□□□ -2.28
RPRD1AQ96P16 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.79□□□□□ -2.28
RPRD1AQ96P16 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
RPRD1AQ96P16 AC068700.1-201ENST00000565862 3754 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 MIR410-201ENST00000362222 80 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 RNU6-454P-201ENST00000364292 107 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 RNU4-41P-201ENST00000364426 143 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.355-201ENST00000365462 98 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.364-201ENST00000365532 101 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 RNU6-42P-201ENST00000384165 107 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 Y_RNA.450-201ENST00000384198 113 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
RPRD1AQ96P16 LINC01399-202ENST00000458450 244 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 U8.22-201ENST00000459141 133 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AL049830.1-201ENST00000468034 425 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 RPS29P25-201ENST00000481709 171 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AC074133.1-201ENST00000515696 183 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 SNORD111.1-201ENST00000516421 86 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 MIR4790-201ENST00000577799 79 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 PRELID3BP2-201ENST00000605362 201 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AC018462.2-201ENST00000605375 395 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AC005828.6-201ENST00000606610 232 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 AC127459.3-201ENST00000624328 466 ntBASIC0.78□□□□□ -2.28
RPRD1AQ96P16 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.118-201ENST00000363300 101 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.557-201ENST00000384680 107 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 MIR100-201ENST00000385259 80 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 MIR942-201ENST00000401111 86 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 MIR873-201ENST00000401120 77 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RNA5SP118-201ENST00000410385 109 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RPS3AP1-201ENST00000413190 320 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC233266.1-201ENST00000454518 96 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC245047.8-201ENST00000456455 284 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RNU7-87P-201ENST00000459343 62 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.77□□□□□ -2.29
RPRD1AQ96P16 MTND5P5-201ENST00000503764 376 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC026782.1-201ENST00000512952 449 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RNU6-1096P-201ENST00000517089 102 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC105029.1-201ENST00000520250 669 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC136628.3-201ENST00000521868 290 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC242852.1-201ENST00000612151 96 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AL391903.3-201ENST00000612158 163 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RMST_2.1-201ENST00000617263 136 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 AC244015.1-201ENST00000622301 99 ntBASIC0.77□□□□□ -2.29
RPRD1AQ96P16 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.77□□□□□ -2.29
RPRD1AQ96P16 RNU6-879P-201ENST00000364328 108 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.295-201ENST00000364918 102 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 SNORD116-13-201ENST00000384408 92 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.498-201ENST00000384460 102 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 MIR608-201ENST00000384820 100 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 MIR520G-201ENST00000385064 90 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.76□□□□□ -2.29
RPRD1AQ96P16 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.76□□□□□ -2.29
RPRD1AQ96P16 snoU13.18-201ENST00000459483 104 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 RNU4-49P-201ENST00000516080 140 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 RNU6-1223P-201ENST00000517124 104 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.76□□□□□ -2.29
RPRD1AQ96P16 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC0.76□□□□□ -2.29
RPRD1AQ96P16 MIR3192-201ENST00000584920 77 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 AC068790.6-201ENST00000602558 258 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.76□□□□□ -2.29
RPRD1AQ96P16 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.76□□□□□ -2.29
RPRD1AQ96P16 RNU6-833P-201ENST00000363486 107 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.796-201ENST00000364268 102 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.799-201ENST00000364992 102 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 RNU6-136P-201ENST00000384663 107 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 MIR605-201ENST00000385078 83 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 RNU6-700P-201ENST00000391043 107 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AL139396.1-201ENST00000421137 167 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.75□□□□□ -2.29
RPRD1AQ96P16 RNU7-90P-201ENST00000459216 62 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 RNU6-625P-201ENST00000459412 107 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 Y_RNA.682-201ENST00000516457 100 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 RNU6-63P-201ENST00000516690 95 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AL358944.1-201ENST00000528537 144 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.75□□□□□ -2.29
RPRD1AQ96P16 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 AL008636.1-201ENST00000625038 1018 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 MIR3674-201ENST00000636576 68 ntBASIC0.75□□□□□ -2.29
RPRD1AQ96P16 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RPRD1AQ96P16 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RPRD1AQ96P16 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
RPRD1AQ96P16 RNU4-12P-201ENST00000365233 139 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 RNU6-318P-201ENST00000384283 103 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
RPRD1AQ96P16 MIR891A-201ENST00000401237 79 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 AL353997.1-201ENST00000432936 108 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 AC093534.1-201ENST00000504977 132 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC0.74□□□□□ -2.29
RPRD1AQ96P16 SNORA40.9-201ENST00000515895 93 ntBASIC0.74□□□□□ -2.29
RPRD1AQ96P16 RNA5SP255-201ENST00000516370 107 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms