Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC138Q96M89 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 SNORD81.1-201ENST00000363064 77 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU6-770P-201ENST00000363929 105 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 Y_RNA.214-201ENST00000364201 112 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 SNORA64-201ENST00000384674 134 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 MIR562-201ENST00000384894 95 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU6-710P-201ENST00000410424 105 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 COX6CP10-201ENST00000416832 224 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 ELOCP20-201ENST00000422460 345 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 AC024067.1-201ENST00000426199 223 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 AC245047.3-201ENST00000429428 127 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.08□□□□□ -2.08
CCDC138Q96M89 snoU13.27-201ENST00000459278 104 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 snoU13.15-201ENST00000459407 104 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU6-1143P-201ENST00000516125 104 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU1-41P-201ENST00000516161 162 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNA5SP458-201ENST00000516188 119 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNY3P15-201ENST00000516297 97 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU1-48P-201ENST00000516400 162 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 RNU6-1337P-201ENST00000516525 95 ntBASIC2.08□□□□□ -2.08
CCDC138Q96M89 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC138Q96M89 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.08□□□□□ -2.08
CCDC138Q96M89 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC138Q96M89 SNORD113-8-201ENST00000363497 74 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 Y_RNA.153-201ENST00000363615 91 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 RNU6-414P-201ENST00000363705 104 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.07□□□□□ -2.08
CCDC138Q96M89 RNU6-1160P-201ENST00000384546 104 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 RNA5SP338-201ENST00000410495 85 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 AL606517.2-201ENST00000442855 241 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 SNORA44.1-201ENST00000517031 108 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC138Q96M89 AC015712.3-201ENST00000559380 164 ntBASIC2.07□□□□□ -2.08
CCDC138Q96M89 SNORA4.2-201ENST00000365313 147 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 RNA5SP425-201ENST00000410336 112 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 AC010655.3-201ENST00000478818 450 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
CCDC138Q96M89 AC025465.3-201ENST00000510570 311 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 RNU6-63P-201ENST00000516690 95 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 MIR1273D-201ENST00000577266 86 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 MIR4709-201ENST00000577272 72 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 MIR5002-201ENST00000584713 97 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 MIR8054-201ENST00000620877 86 ntBASIC2.06□□□□□ -2.08
CCDC138Q96M89 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CCDC138Q96M89 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC138Q96M89 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.05□□□□□ -2.08
CCDC138Q96M89 Y_RNA.19-201ENST00000362462 99 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 Y_RNA.383-201ENST00000383855 97 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 RNU6-439P-201ENST00000384188 106 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 RNU6-136P-201ENST00000384663 107 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 MIR606-201ENST00000384851 96 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 MIR520G-201ENST00000385064 90 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 Y_RNA.602-201ENST00000410535 92 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 AC113618.1-201ENST00000416747 285 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 POLR2KP2-201ENST00000438155 177 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 LINC01399-202ENST00000458450 244 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 AC025033.1-201ENST00000463883 194 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.05□□□□□ -2.08
CCDC138Q96M89 MRPS35P2-201ENST00000508242 191 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 RNU6-341P-201ENST00000516973 96 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 IGKV3-31-201ENST00000523109 329 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 DEFB117-201ENST00000602356 141 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC138Q96M89 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC138Q96M89 MIR8074-201ENST00000615081 81 ntBASIC2.05□□□□□ -2.08
CCDC138Q96M89 RNU4-90P-201ENST00000362773 141 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 Y_RNA.286-201ENST00000364813 102 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCDC138Q96M89 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNU6-440P-201ENST00000390882 105 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNA5SP511-201ENST00000410487 115 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RN7SKP200-201ENST00000410564 320 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 AL021397.1-201ENST00000451806 248 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 AC091021.1-201ENST00000468051 388 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 RNU6-496P-201ENST00000516145 99 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 AC091178.2-201ENST00000584401 117 ntBASIC2.04□□□□□ -2.08
CCDC138Q96M89 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC138Q96M89 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC138Q96M89 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC138Q96M89 Y_RNA.105-201ENST00000363182 111 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 Y_RNA.222-201ENST00000364264 102 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 MIR30A-201ENST00000385092 71 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 RNU6-121P-201ENST00000410525 99 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 AL162725.1-201ENST00000435405 301 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC138Q96M89 JTBP1-201ENST00000441314 247 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC138Q96M89 SNORA31.10-201ENST00000516482 106 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 Y_RNA.720-201ENST00000517166 92 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC138Q96M89 AL929325.1-201ENST00000603096 117 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 MIR219B-201ENST00000637023 88 ntBASIC2.03□□□□□ -2.08
CCDC138Q96M89 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
CCDC138Q96M89 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 266.6 ms