Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
VCPIP1Q96JH7 ZNF720P1-201ENST00000562403 1939 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU1-91P-201ENST00000364746 163 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.398-201ENST00000383952 99 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.435-201ENST00000384095 112 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 SNORA40.19-201ENST00000390846 128 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU6-763P-201ENST00000390865 106 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU6-394P-201ENST00000410735 107 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU2-63P-201ENST00000410792 194 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU6-1135P-201ENST00000411083 103 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 U8.19-201ENST00000459095 133 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 AC018868.1-201ENST00000491307 315 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNU7-200P-201ENST00000516105 62 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 RNA5SP281-201ENST00000516504 135 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 SNORA48.11-201ENST00000517015 89 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 AC132825.6-201ENST00000638861 357 ntBASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
VCPIP1Q96JH7 Y_RNA.571-201ENST00000384753 98 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 MIR221-201ENST00000385135 110 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 AL031003.1-201ENST00000404229 172 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 RNU2-2P-201ENST00000410396 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 CYP2C59P-201ENST00000457790 269 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 RNU2-4P-201ENST00000606190 192 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.15-201ENST00000611544 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 MIR6840-201ENST00000611937 71 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.16-201ENST00000613119 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.12-201ENST00000613778 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.9-201ENST00000615427 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.11-201ENST00000616345 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.2-201ENST00000616535 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.3-201ENST00000617785 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.19-201ENST00000618602 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 RNU2-1-201ENST00000618664 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.6-201ENST00000619225 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.5-201ENST00000619465 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 U2.10-201ENST00000620268 191 ntBASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
VCPIP1Q96JH7 AC134026.1-201ENST00000623249 2239 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 RNU6-801P-201ENST00000364087 105 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 SNORD115-30-201ENST00000364117 82 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 RNU6-1305P-201ENST00000364353 104 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 RNA5SP240-201ENST00000365355 128 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 RNU2-48P-201ENST00000410694 191 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 RNU2-32P-201ENST00000411193 191 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 TMSB4XP3-201ENST00000445144 114 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 MIR1248-201ENST00000629190 106 ntBASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.32□□□□□ -2.04
VCPIP1Q96JH7 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.7-201ENST00000362352 102 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 RNA5SP99-201ENST00000364020 114 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.238-201ENST00000364441 102 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 RNY1P5-201ENST00000383890 115 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 SNORA67.2-201ENST00000384300 149 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 MIR548B-201ENST00000385247 97 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 SNORA26.5-201ENST00000391215 123 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 TOMM22P2-201ENST00000430735 237 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AL135790.2-201ENST00000437701 267 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 RNU6-548P-201ENST00000517083 115 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 SUMO2P18-201ENST00000518873 252 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC136628.3-201ENST00000521868 290 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC018630.3-201ENST00000542637 96 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 MIR5002-201ENST00000584713 97 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 AC004832.4-201ENST00000608952 331 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 MIR6132-201ENST00000622083 109 ntBASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
VCPIP1Q96JH7 SNORD114-1-201ENST00000362705 72 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 U3.8-201ENST00000363675 217 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.182-201ENST00000363880 111 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU6-1048P-201ENST00000364054 107 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU6-743P-201ENST00000364151 106 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.243-201ENST00000364481 109 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU6-546P-201ENST00000383991 107 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 Y_RNA.441-201ENST00000384123 112 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 MIR144-201ENST00000384886 86 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 MIR613-201ENST00000385248 95 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU5E-9P-201ENST00000411164 104 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 AL603825.1-201ENST00000438481 80 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RPS20P10-201ENST00000451209 253 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU6-991P-201ENST00000516168 107 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU5F-4P-201ENST00000516581 114 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 SCARNA16.3-201ENST00000516595 184 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 RNU6-1098P-201ENST00000516772 96 ntBASIC2.3□□□□□ -2.04
VCPIP1Q96JH7 AC108706.1-201ENST00000611053 297 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms