Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MIR128-1-201ENST00000384921 82 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 SNORA79-201ENST00000408376 140 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 HMGN2P3-201ENST00000433603 273 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 HMGN2P5-201ENST00000436882 273 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 RNU2-56P-201ENST00000516826 190 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 MIR5094-201ENST00000578766 85 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 AP003355.3-201ENST00000623465 114 ntBASIC3.42□□□□□ -1.86
CCDC97Q96F63 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.42□□□□□ -1.86
CCDC97Q96F63 RNU6-1019P-201ENST00000364424 107 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 RNU2-55P-201ENST00000411146 174 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 SNRPGP8-201ENST00000454064 226 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 RN7SL297P-201ENST00000483161 293 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 SNORD77.4-201ENST00000516158 81 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 RNU7-121P-201ENST00000516604 62 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 MIR2276-201ENST00000516886 89 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 IGKV2-26-201ENST00000518305 343 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 AC022217.4-201ENST00000604389 163 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 YPEL5P2-201ENST00000605553 359 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC97Q96F63 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC97Q96F63 AC009487.2-201ENST00000420969 6821 ntBASIC3.41□□□□□ -1.86
CCDC97Q96F63 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
CCDC97Q96F63 VTRNA1-1-201ENST00000363120 99 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 Y_RNA.337-201ENST00000365312 102 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 Y_RNA.432-201ENST00000384087 111 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 AC245047.3-201ENST00000429428 127 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 SNRPGP10-201ENST00000432323 225 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 AC107083.1-201ENST00000439643 279 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 AL049830.1-201ENST00000468034 425 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 Y_RNA.778-201ENST00000620203 90 ntBASIC3.4□□□□□ -1.87
CCDC97Q96F63 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC97Q96F63 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC97Q96F63 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC97Q96F63 AL606517.2-201ENST00000442855 241 ntBASIC3.39□□□□□ -1.87
CCDC97Q96F63 RN7SL499P-201ENST00000481141 276 ntBASIC3.39□□□□□ -1.87
CCDC97Q96F63 RNU6-1299P-201ENST00000516316 100 ntBASIC3.39□□□□□ -1.87
CCDC97Q96F63 AC084364.2-201ENST00000546924 395 ntBASIC3.39□□□□□ -1.87
CCDC97Q96F63 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC97Q96F63 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CCDC97Q96F63 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC97Q96F63 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC97Q96F63 MIR30E-201ENST00000362104 92 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 MIR148B-201ENST00000362252 99 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 RNU6-151P-201ENST00000364158 107 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 Y_RNA.400-201ENST00000383963 111 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 RNU6-484P-201ENST00000384016 107 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 RNU1-52P-201ENST00000384190 164 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 RNA5SP109-201ENST00000391010 116 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 MIR4325-201ENST00000583049 90 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 DNAJC19P2-201ENST00000593340 302 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 AL591926.4-201ENST00000616895 298 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 CTSLP2-204ENST00000629029 392 ntBASIC3.38□□□□□ -1.87
CCDC97Q96F63 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC97Q96F63 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCDC97Q96F63 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC97Q96F63 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC97Q96F63 MIR126-201ENST00000362291 85 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC97Q96F63 AC245047.4-201ENST00000433189 144 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC97Q96F63 AC069257.2-201ENST00000441819 155 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 AC115115.1-201ENST00000449927 248 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 RPS27P1-201ENST00000450552 247 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 OR9P1P-201ENST00000496431 281 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 SNORD116-25-201ENST00000516517 92 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 RNU6-197P-201ENST00000516680 100 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 RNU7-149P-201ENST00000516739 59 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 MFSD8-233ENST00000641482 4860 ntBASIC3.37□□□□□ -1.87
CCDC97Q96F63 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC97Q96F63 RNU1-70P-201ENST00000362618 164 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 SNORA3A-201ENST00000364113 130 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC97Q96F63 SNORA12.1-201ENST00000390873 148 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 BMS1P22-201ENST00000414726 313 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC97Q96F63 RPL23AP67-201ENST00000465341 474 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 NDUFA4P2-201ENST00000489989 244 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 AL035425.3-201ENST00000564206 4996 ntBASIC3.36□□□□□ -1.87
CCDC97Q96F63 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC97Q96F63 Y_RNA.521-201ENST00000384560 114 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 MLLT10P1-201ENST00000418346 262 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC97Q96F63 RNVU1-2-201ENST00000516326 135 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 Y_RNA.714-201ENST00000517065 90 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 Pinc.1-201ENST00000616452 154 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 MIR3658-201ENST00000636291 56 ntBASIC3.35□□□□□ -1.87
CCDC97Q96F63 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC97Q96F63 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
CCDC97Q96F63 RNU6-1138P-201ENST00000365359 106 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 SNORA48.1-201ENST00000390879 135 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 RNU2-70P-201ENST00000410718 179 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC97Q96F63 RNU6-789P-201ENST00000517105 102 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 AL160236.1-201ENST00000556317 195 ntBASIC3.34□□□□□ -1.87
CCDC97Q96F63 MIR5680-201ENST00000577577 84 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms