Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SNORA2.2-201ENST00000365473 135 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 AL031003.1-201ENST00000404229 172 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 AL162725.1-201ENST00000435405 301 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 RNU6-322P-201ENST00000516010 103 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 RNU6-699P-201ENST00000517081 110 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 AC068338.1-201ENST00000565567 176 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 VN1R91P-201ENST00000594377 169 ntBASIC1.31□□□□□ -2.2
VPS33AQ96AX1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VPS33AQ96AX1 AC005592.1-201ENST00000566527 1640 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 MIRLET7C-201ENST00000362160 84 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 RNY3P11-201ENST00000364153 102 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 MIR618-201ENST00000385287 98 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 AL451046.2-201ENST00000403074 277 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 OOSP1P1-201ENST00000423265 274 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 AC233266.1-201ENST00000454518 96 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 snoU13.15-201ENST00000459407 104 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 AC091951.2-201ENST00000500762 203 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 RNU6-63P-201ENST00000516690 95 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 RNU6-922P-201ENST00000516753 99 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 MIR4659A-201ENST00000580269 81 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 AC242852.1-201ENST00000612151 96 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 AC244015.1-201ENST00000622301 99 ntBASIC1.3□□□□□ -2.2
VPS33AQ96AX1 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
VPS33AQ96AX1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 RNU6-626P-201ENST00000363354 107 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 RNU6-20P-201ENST00000384106 107 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AL354751.2-201ENST00000415471 210 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AC093019.1-201ENST00000443135 252 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.29□□□□□ -2.2
VPS33AQ96AX1 RNU7-12P-201ENST00000516030 62 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AL355375.2-201ENST00000574825 175 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AL357312.1-201ENST00000603879 298 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 AC068647.2-201ENST00000637380 353 ntBASIC1.29□□□□□ -2.2
VPS33AQ96AX1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS33AQ96AX1 RNU6-457P-201ENST00000363999 107 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 RNU4-41P-201ENST00000364426 143 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 SNORD41-201ENST00000386967 70 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 RNA5SP511-201ENST00000410487 115 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 RNU2-61P-201ENST00000411069 191 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 Y_RNA.632-201ENST00000459189 102 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 RNU6-875P-201ENST00000516488 106 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 SNORD116.3-201ENST00000517176 78 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 MIR3945-201ENST00000581853 98 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 AC084781.2-201ENST00000615568 161 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 AL138825.1-201ENST00000618587 192 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 U6.92-201ENST00000636464 89 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.28□□□□□ -2.2
VPS33AQ96AX1 ZNF72P-201ENST00000425869 1908 ntBASIC1.28□□□□□ -2.2
VPS33AQ96AX1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
VPS33AQ96AX1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
VPS33AQ96AX1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.28□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.263-201ENST00000364659 114 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.303-201ENST00000364998 94 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 RNU6-1009P-201ENST00000390996 107 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 AC015922.2-201ENST00000435593 184 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 Z98949.2-201ENST00000440996 144 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 DYNLT3P2-201ENST00000442517 295 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 SNORD19B-201ENST00000459623 84 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 RNU6-917P-201ENST00000516294 104 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 AC022616.4-201ENST00000522985 181 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 AC006600.1-201ENST00000572529 153 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 MIR4801-201ENST00000582704 82 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 AC027279.3-201ENST00000625055 122 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 AC091812.1-201ENST00000432235 1948 ntBASIC1.27□□□□□ -2.21
VPS33AQ96AX1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RNU6-833P-201ENST00000363486 107 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RNU6-136P-201ENST00000384663 107 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RNU6-1199P-201ENST00000411249 104 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.26□□□□□ -2.21
VPS33AQ96AX1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RPS4XP11-201ENST00000446897 772 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 CHEK2P4-201ENST00000450340 246 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 CYCTP-201ENST00000504253 315 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RNU6-155P-201ENST00000516347 100 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 MIR4303-201ENST00000581299 66 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 AC022441.3-201ENST00000605737 136 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 AC011476.5-201ENST00000615594 130 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 MIR7843-201ENST00000622274 79 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 AC091925.1-201ENST00000623204 462 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 MIR4272-201ENST00000635924 64 ntBASIC1.26□□□□□ -2.21
VPS33AQ96AX1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
VPS33AQ96AX1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 SNORA70.7-201ENST00000384159 133 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 RNU6-1105P-201ENST00000384774 107 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 MIR891A-201ENST00000401237 79 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.25□□□□□ -2.21
VPS33AQ96AX1 AC236972.2-201ENST00000434979 310 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 270.2 ms