Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 RNU6-874P-201ENST00000362390 105 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 RNA5SP361-201ENST00000362686 118 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 RNU6-407P-201ENST00000365280 104 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 Y_RNA.361-201ENST00000365515 120 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.67□□□□□ -2.3
CPNE4Q96A23 Y_RNA.516-201ENST00000384541 124 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 RNU6-376P-201ENST00000384731 106 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 MIR608-201ENST00000384820 100 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 MIR520G-201ENST00000385064 90 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 MIR548K-201ENST00000408406 116 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC002429.1-201ENST00000437672 148 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AP002001.1-203ENST00000534002 267 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC018448.1-201ENST00000552843 316 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 CYP3A137P-201ENST00000562436 69 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 MIR151B-201ENST00000584249 96 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC018638.8-201ENST00000588755 281 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC004832.4-201ENST00000608952 331 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC093913.1-201ENST00000614178 329 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 AC106800.4-201ENST00000614905 153 ntBASIC0.67□□□□□ -2.3
CPNE4Q96A23 RNY1P16-201ENST00000363063 111 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 Y_RNA.267-201ENST00000364679 109 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CPNE4Q96A23 SNORA80D-201ENST00000384488 135 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 Y_RNA.557-201ENST00000384680 107 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 Y_RNA.594-201ENST00000410373 140 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.66□□□□□ -2.3
CPNE4Q96A23 AC074085.1-201ENST00000413598 418 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.66□□□□□ -2.3
CPNE4Q96A23 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.66□□□□□ -2.3
CPNE4Q96A23 RPL39P39-201ENST00000455840 151 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 SNORD124-201ENST00000459577 104 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 RPS26P48-201ENST00000491713 339 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 Y_RNA.682-201ENST00000516457 100 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 AC090142.3-201ENST00000519012 385 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 AL117336.2-201ENST00000602435 335 ntBASIC0.66□□□□□ -2.3
CPNE4Q96A23 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
CPNE4Q96A23 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CPNE4Q96A23 RNU6-454P-201ENST00000364292 107 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 Y_RNA.453-201ENST00000384223 109 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 RNU6-318P-201ENST00000384283 103 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 SNORD116-4-201ENST00000384733 96 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 MIR200A-201ENST00000384875 90 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 AC114482.1-201ENST00000418010 247 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 PCNPP5-201ENST00000452246 481 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 AC093850.1-201ENST00000454121 251 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 RNU6-625P-201ENST00000459412 107 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 RNU7-12P-201ENST00000516030 62 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 SNORA70.12-201ENST00000516084 153 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 Y_RNA.670-201ENST00000516255 105 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 RNU6-1291P-201ENST00000516591 104 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.65□□□□□ -2.31
CPNE4Q96A23 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 MIR6835-201ENST00000621552 64 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 AC127459.3-201ENST00000624328 466 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 MIR3674-201ENST00000636576 68 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 AC068700.1-201ENST00000565862 3754 ntBASIC0.65□□□□□ -2.31
CPNE4Q96A23 RNU6-833P-201ENST00000363486 107 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 RNU6-879P-201ENST00000364328 108 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 Y_RNA.243-201ENST00000364481 109 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 RNU6-969P-201ENST00000383900 105 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 SNORD115-47-201ENST00000391226 86 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 RNU6-510P-201ENST00000391239 108 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 MIR548J-201ENST00000408833 112 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 RNU6-1050P-201ENST00000410388 107 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 U8.22-201ENST00000459141 133 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 AL049830.1-201ENST00000468034 425 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 SNORA40.9-201ENST00000515895 93 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 Y_RNA.708-201ENST00000516950 96 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 AC068790.6-201ENST00000602558 258 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 AC027279.3-201ENST00000625055 122 ntBASIC0.64□□□□□ -2.31
CPNE4Q96A23 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.64□□□□□ -2.31
CPNE4Q96A23 Y_RNA.116-201ENST00000363292 103 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 Y_RNA.124-201ENST00000363339 93 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 RNU4-41P-201ENST00000364426 143 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 Y_RNA.339-201ENST00000365325 102 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 Y_RNA.498-201ENST00000384460 102 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 MIR526A1-201ENST00000384897 85 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
CPNE4Q96A23 MIR548F5-201ENST00000408421 86 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 MIR1277-201ENST00000408536 78 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 AL589823.1-201ENST00000429577 183 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 RPS3AP52-201ENST00000435639 297 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 Z98949.2-201ENST00000440996 144 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 RNU7-87P-201ENST00000459343 62 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 RNU7-21P-201ENST00000459430 62 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 CYCTP-201ENST00000504253 315 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 SNORD111.1-201ENST00000516421 86 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 RNU6-1096P-201ENST00000517089 102 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 AC133485.1-201ENST00000567176 124 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 AC138907.6-201ENST00000568401 126 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 AL590095.2-201ENST00000604136 117 ntBASIC0.63□□□□□ -2.31
CPNE4Q96A23 PRELID3BP2-201ENST00000605362 201 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms