Protein–RNA interactions for Protein: Q969P6

TOP1MT, DNA topoisomerase I, mitochondrial, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MTQ969P6 AC097520.1-201ENST00000624435 385 ntBASIC0.3□□□□□ -2.36
TOP1MTQ969P6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
TOP1MTQ969P6 RNA5SP62-201ENST00000363457 110 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 Y_RNA.151-201ENST00000363566 112 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 Y_RNA.381-201ENST00000365666 102 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 MIR136-201ENST00000385207 82 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 SNORD105-201ENST00000386910 85 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 AC244098.3-201ENST00000424803 96 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 MTCO2P12-201ENST00000427426 682 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 snoU13.25-201ENST00000458945 104 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 HMGN2P26-201ENST00000463169 339 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 MTND3P7-201ENST00000474435 343 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 HMGN1P10-201ENST00000474557 553 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 SNORA74.3-201ENST00000517108 154 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 AC092954.2-201ENST00000609103 430 ntBASIC0.29□□□□□ -2.36
TOP1MTQ969P6 MIR1-1-201ENST00000362147 71 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 Y_RNA.231-201ENST00000364358 102 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 SNORD113.3-201ENST00000364630 78 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 Y_RNA.280-201ENST00000364765 112 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 RNU4-20P-201ENST00000365601 151 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 MIR514A2-201ENST00000385131 88 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 MIR514A3-201ENST00000385132 88 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AC243428.1-201ENST00000421099 264 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC0.28□□□□□ -2.36
TOP1MTQ969P6 Z98949.2-201ENST00000440996 144 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AL137792.2-201ENST00000443484 235 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 RPL30P10-201ENST00000488148 337 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.28□□□□□ -2.36
TOP1MTQ969P6 RNU7-43P-201ENST00000516554 64 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AF235103.2-201ENST00000525753 346 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AC093027.1-201ENST00000546698 429 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 AC019193.3-201ENST00000609144 554 ntBASIC0.28□□□□□ -2.36
TOP1MTQ969P6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
TOP1MTQ969P6 RNU6-254P-201ENST00000363377 107 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 RNU4-45P-201ENST00000365469 141 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.412-201ENST00000384001 104 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.490-201ENST00000384413 102 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 MIR873-201ENST00000401120 77 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 MIR1185-1-201ENST00000408598 86 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.27□□□□□ -2.37
TOP1MTQ969P6 RNU6-1114P-201ENST00000516022 107 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 RNA5SP395-201ENST00000516567 118 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.695-201ENST00000516715 107 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AC090617.3-201ENST00000573670 475 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 MIR4300-201ENST00000581016 96 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AC024933.1-201ENST00000608472 348 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 AC073114.1-201ENST00000612027 490 ntBASIC0.27□□□□□ -2.37
TOP1MTQ969P6 SNORD68-201ENST00000363214 84 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 MIR140-201ENST00000385282 100 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 MIR1827-201ENST00000408549 66 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.26□□□□□ -2.37
TOP1MTQ969P6 RNU6-956P-201ENST00000458868 103 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 AC074133.1-201ENST00000515696 183 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 RNU6-415P-201ENST00000516252 97 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 AC036111.3-201ENST00000526389 112 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 AC124303.1-201ENST00000605703 360 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 RNU6-94P-201ENST00000607728 107 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 AL008636.1-201ENST00000625038 1018 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC0.26□□□□□ -2.37
TOP1MTQ969P6 SNORD114-7-201ENST00000362520 77 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 SNORA25.3-201ENST00000363205 127 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.25□□□□□ -2.37
TOP1MTQ969P6 RNU6-1297P-201ENST00000384415 104 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 MIR517A-201ENST00000385001 87 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 MIR1298-201ENST00000408783 112 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 PIGPP3-201ENST00000425307 415 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 USP9YP16-201ENST00000430287 407 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 ERLEC1P1-201ENST00000433806 578 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 UQCRBP2-201ENST00000447827 297 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 USP9YP23-201ENST00000455085 407 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AC114811.1-201ENST00000507207 168 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.25□□□□□ -2.37
TOP1MTQ969P6 RNU6-1116P-201ENST00000517269 99 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AP003327.1-201ENST00000529684 127 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.25□□□□□ -2.37
TOP1MTQ969P6 MTATP6P24-201ENST00000576835 677 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 MIR5696-201ENST00000578474 85 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AC104695.3-201ENST00000604052 296 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 AC067863.3-201ENST00000624172 122 ntBASIC0.25□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.167-201ENST00000363735 109 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 AC083904.1-201ENST00000487828 231 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 SNORA68.3-201ENST00000515906 83 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.706-201ENST00000516933 99 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.24□□□□□ -2.37
TOP1MTQ969P6 AL158211.1-201ENST00000566763 763 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 MIR4764-201ENST00000580680 88 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 MIR4273-201ENST00000582824 84 ntBASIC0.24□□□□□ -2.37
TOP1MTQ969P6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC0.24□□□□□ -2.37
TOP1MTQ969P6 RNU6-1085P-201ENST00000363576 107 ntBASIC0.23□□□□□ -2.37
TOP1MTQ969P6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.23□□□□□ -2.37
TOP1MTQ969P6 RNU6-281P-201ENST00000384212 103 ntBASIC0.23□□□□□ -2.37
TOP1MTQ969P6 RNU6-95P-201ENST00000384697 107 ntBASIC0.23□□□□□ -2.37
TOP1MTQ969P6 Y_RNA.582-201ENST00000391023 95 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms