Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AC098869.1-201ENST00000481627 292 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 RPL23AP63-201ENST00000498752 471 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 RNU1-41P-201ENST00000516161 162 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP200-201ENST00000516360 103 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 RNU1-48P-201ENST00000516400 162 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 AL117187.1-201ENST00000555482 181 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 MIR3145-201ENST00000580727 82 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 MIR4713-201ENST00000582691 75 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 AC010900.2-201ENST00000604508 210 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 AC018630.2-201ENST00000534866 2403 ntBASIC1.88□□□□□ -2.11
RAB40AQ8WXH6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNU6-238P-201ENST00000363313 106 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNU6-290P-201ENST00000365212 101 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP109-201ENST00000391010 116 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNU6-855P-201ENST00000410395 104 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNU6-63P-201ENST00000516690 95 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP481-201ENST00000516814 122 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 AC008269.2-201ENST00000561915 1105 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 AC022254.1-201ENST00000567857 235 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 AC002984.1-201ENST00000591692 448 ntBASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.87□□□□□ -2.11
RAB40AQ8WXH6 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 snoU2_19.2-201ENST00000363024 80 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.569-201ENST00000384749 103 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.574-201ENST00000384766 95 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 MIR215-201ENST00000384858 110 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 AC245047.3-201ENST00000429428 127 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 HSPE1P9-201ENST00000440046 311 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 MIR4648-201ENST00000580107 72 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 AL096840.1-201ENST00000603287 93 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 AC037487.3-201ENST00000606668 112 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 MIR6079-201ENST00000635807 62 ntBASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.86□□□□□ -2.11
RAB40AQ8WXH6 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 RNU4-80P-201ENST00000363200 141 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 RNU6-1309P-201ENST00000363305 108 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 MIR562-201ENST00000384894 95 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 MIR520G-201ENST00000385064 90 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 MIR221-201ENST00000385135 110 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 SNORA53-201ENST00000391141 249 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 HMGN2P19-201ENST00000425149 265 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AL606517.2-201ENST00000442855 241 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AC091021.1-201ENST00000468051 388 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 RPL36AP21-201ENST00000490372 323 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP364-201ENST00000516938 78 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AC022217.4-201ENST00000604389 163 ntBASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.85□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.84-201ENST00000363011 104 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.149-201ENST00000363558 117 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNU4-13P-201ENST00000364019 141 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNA5SP160-201ENST00000364866 120 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 SNORD116-13-201ENST00000384408 92 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.512-201ENST00000384518 102 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.541-201ENST00000384640 113 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNU6-950P-201ENST00000384651 107 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNU6-136P-201ENST00000384663 107 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNU6-1248P-201ENST00000391096 64 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 MIR1261-201ENST00000408659 82 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 COX6CP10-201ENST00000416832 224 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 AL358176.2-201ENST00000425769 204 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RPS27P1-201ENST00000450552 247 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 MTND4LP30-201ENST00000454092 297 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 HMGN1P10-201ENST00000474557 553 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 MRPS17P9-201ENST00000511924 393 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 RNU6-570P-201ENST00000517051 105 ntBASIC1.84□□□□□ -2.11
RAB40AQ8WXH6 Y_RNA.136-201ENST00000363444 102 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 SNORA4.2-201ENST00000365313 147 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 Y_RNA.341-201ENST00000365341 102 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 Y_RNA.418-201ENST00000384029 102 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 RNU6-514P-201ENST00000384208 107 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 RNA5SP511-201ENST00000410487 115 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 AL162725.1-201ENST00000435405 301 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 RPS20P10-201ENST00000451209 253 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 snoU13.27-201ENST00000459278 104 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 AC004832.4-201ENST00000608952 331 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 U6.104-201ENST00000637979 90 ntBASIC1.83□□□□□ -2.12
RAB40AQ8WXH6 SNORA25.1-201ENST00000362326 128 ntBASIC1.82□□□□□ -2.12
RAB40AQ8WXH6 Y_RNA.267-201ENST00000364679 109 ntBASIC1.82□□□□□ -2.12
RAB40AQ8WXH6 Y_RNA.456-201ENST00000384232 111 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 189.1 ms