Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC008739.2-201ENST00000597006 317 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 MIR7106-201ENST00000612419 65 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
SHKBP1Q8TBC3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 SNORA71.1-201ENST00000364523 117 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 RNA5SP167-201ENST00000365461 116 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 Y_RNA.500-201ENST00000384466 111 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 MIR590-201ENST00000385008 97 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-592P-201ENST00000411333 103 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 AC016909.1-201ENST00000415916 166 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 AC010099.1-201ENST00000455434 375 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 RPL23AP94-201ENST00000512518 302 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-504P-201ENST00000516568 104 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 MIR3117-201ENST00000584034 78 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 5S_rRNA.11-201ENST00000618635 84 ntBASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.24□□□□□ -1.89
SHKBP1Q8TBC3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 RNU1-22P-201ENST00000363334 158 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 Y_RNA.220-201ENST00000364244 109 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-198P-201ENST00000384258 104 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 MIR29B2-201ENST00000385055 81 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 SNORD67-201ENST00000390833 111 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 RN7SL75P-201ENST00000461926 281 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 RPS27P22-201ENST00000478056 241 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 RNU1-61P-201ENST00000516107 151 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 AC011604.1-201ENST00000545978 196 ntBASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SHKBP1Q8TBC3 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 EIF4EP4-201ENST00000424916 578 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 RNU6ATAC17P-201ENST00000516074 71 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-1149P-201ENST00000516810 97 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 SCARNA15-202ENST00000516881 127 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 RNU6-158P-201ENST00000517104 100 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 AC109329.2-201ENST00000519658 482 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 AC245166.1-201ENST00000521012 253 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 uc_338.14-201ENST00000613162 166 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 MIR6076-201ENST00000617521 113 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 AC009487.4-201ENST00000624969 3585 ntBASIC3.22□□□□□ -1.89
SHKBP1Q8TBC3 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 MIR22-201ENST00000362190 85 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-234P-201ENST00000365229 104 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 Y_RNA.362-201ENST00000365518 110 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 SNORD61-201ENST00000384252 73 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-820P-201ENST00000384273 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-1235P-201ENST00000384559 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-1152P-201ENST00000384576 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 MIR181B1-201ENST00000385240 110 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RPL21P3-201ENST00000395517 478 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-498P-201ENST00000459468 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 NDUFA4P2-201ENST00000489989 244 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 AC011406.1-201ENST00000512440 370 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 AC097462.1-201ENST00000514125 324 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 AC096725.1-201ENST00000514266 313 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 RNU6-948P-201ENST00000516374 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 AP000867.2-201ENST00000532468 320 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 MIR5009-201ENST00000578736 100 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 Y_RNA.818-201ENST00000618813 71 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 U6.73-201ENST00000619194 103 ntBASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.21□□□□□ -1.9
SHKBP1Q8TBC3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 RNA5SP383-201ENST00000362934 120 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 SNORA5B-201ENST00000363786 132 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 Y_RNA.198-201ENST00000364013 98 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 SNORD31B-201ENST00000364977 69 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 MIR450A2-201ENST00000385022 100 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AL117342.1-201ENST00000404861 406 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AL031121.1-201ENST00000406553 254 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 MIR1294-201ENST00000408503 142 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 SNORA19.1-201ENST00000410656 129 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AC008134.1-201ENST00000420943 193 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AL139132.1-201ENST00000431587 344 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 MTATP8P2-201ENST00000435212 202 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 HMGN2P16-201ENST00000456802 261 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 RPL30P14-201ENST00000482744 348 ntBASIC3.2□□□□□ -1.9
SHKBP1Q8TBC3 MRPS17P9-201ENST00000511924 393 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms