Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 RNU6-966P-201ENST00000516479 104 ntBASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 MIR4524B-201ENST00000581569 115 ntBASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
PRPF38AQ8NAV1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.136-201ENST00000363444 102 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 Y_RNA.286-201ENST00000364813 102 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-806P-201ENST00000365147 105 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RNU6-376P-201ENST00000384731 106 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RNU2-7P-201ENST00000410794 178 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RPL21P38-201ENST00000418090 167 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RPL23AP6-201ENST00000446637 472 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 RNA5SP233-201ENST00000459153 113 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 AL163195.1-201ENST00000496941 348 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 MTCO2P24-201ENST00000515611 426 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 AC022254.1-201ENST00000567857 235 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 MIR8062-201ENST00000621515 85 ntBASIC2.47□□□□□ -2.01
PRPF38AQ8NAV1 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.47-201ENST00000362697 108 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 snoU2_19.2-201ENST00000363024 80 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-326P-201ENST00000365480 107 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-514P-201ENST00000384208 107 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-950P-201ENST00000384651 107 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.556-201ENST00000384677 113 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 MIR1302-6-201ENST00000408466 90 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 HMGN2P38-201ENST00000423806 265 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 snoU13.23-201ENST00000458863 104 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-237P-201ENST00000515985 71 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNA5SP481-201ENST00000516814 122 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 RNU2-31P-201ENST00000516954 155 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 DEFB117-201ENST00000602356 141 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 AL627230.6-201ENST00000611129 280 ntBASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.84-201ENST00000363011 104 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-102P-201ENST00000384485 104 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-296P-201ENST00000384608 107 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 HMGN1P10-201ENST00000474557 553 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 TRBVB-201ENST00000477100 408 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 AC098869.1-201ENST00000481627 292 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 AC090255.1-201ENST00000495779 349 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 SNORA31.17-201ENST00000516953 127 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 AC073413.2-201ENST00000604332 360 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 U6.108-201ENST00000637764 58 ntBASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
PRPF38AQ8NAV1 AC018630.2-201ENST00000534866 2403 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 SNORA25.1-201ENST00000362326 128 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.26-201ENST00000362539 101 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.133-201ENST00000363428 110 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 SNORA63D-201ENST00000364359 132 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 MIR520G-201ENST00000385064 90 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-855P-201ENST00000410395 104 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 MTCYBP9-201ENST00000431021 303 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 AL591806.2-201ENST00000433122 173 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 AC104435.1-201ENST00000483483 166 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 RPL36AP21-201ENST00000490372 323 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 RNU7-128P-201ENST00000517247 62 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 DEFB122-202ENST00000569013 197 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 MIR4448-201ENST00000584360 86 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 AC010900.2-201ENST00000604508 210 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 AL162730.1-201ENST00000605734 292 ntBASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.44□□□□□ -2.02
PRPF38AQ8NAV1 AL356292.1-201ENST00000283110 373 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 MIRLET7G-201ENST00000362280 84 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-117P-201ENST00000365415 107 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.456-201ENST00000384232 111 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 MIR215-201ENST00000384858 110 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-1203P-201ENST00000410703 110 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 MTND3P2-201ENST00000438452 342 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 MIR4713-201ENST00000582691 75 ntBASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
PRPF38AQ8NAV1 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 RNU4-13P-201ENST00000364019 141 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.341-201ENST00000365341 102 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 RNA5SP37-201ENST00000365420 130 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.368-201ENST00000365547 113 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 Y_RNA.541-201ENST00000384640 113 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 RPL23AP63-201ENST00000498752 471 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 RNU6-570P-201ENST00000517051 105 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 RNA5SP437-201ENST00000517249 129 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 AC015712.3-201ENST00000559380 164 ntBASIC2.42□□□□□ -2.02
PRPF38AQ8NAV1 AL512605.2-201ENST00000592972 256 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms