Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 MRPL42P3-201ENST00000401492 326 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AC004965.1-201ENST00000413033 213 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AL161935.2-201ENST00000414627 60 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RPS27P16-201ENST00000425758 201 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AC245517.4-201ENST00000448601 281 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-902P-201ENST00000517212 91 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 SUMO2P16-201ENST00000519475 264 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 RPL21P9-201ENST00000556149 474 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AC006380.1-201ENST00000603598 186 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 SNORD58B-201ENST00000607313 66 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AL050343.2-201ENST00000607338 280 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 MIR6845-201ENST00000613182 61 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 AC090971.5-201ENST00000621102 293 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 uc_338.22-201ENST00000622722 187 ntBASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CCDC71LQ8N9Z2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-324P-201ENST00000363957 106 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.243-201ENST00000364481 109 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 SNORA25.8-201ENST00000364831 128 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU1-115P-201ENST00000365329 160 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNA5SP259-201ENST00000365541 109 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 MIR194-1-201ENST00000384892 85 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-440P-201ENST00000390882 105 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 MIR873-201ENST00000401120 77 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-155P-201ENST00000516347 100 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-63P-201ENST00000516690 95 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 RNU2-12P-201ENST00000517216 168 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC015688.6-201ENST00000577737 104 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AL365434.2-201ENST00000607979 234 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AL138825.1-201ENST00000618587 192 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 MIR8054-201ENST00000620877 86 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC090574.1-201ENST00000623186 233 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 MIR6079-201ENST00000635807 62 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC018630.2-201ENST00000534866 2403 ntBASIC1.14□□□□□ -2.23
CCDC71LQ8N9Z2 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.31-201ENST00000362574 102 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.61-201ENST00000362835 102 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 SNORD115-30-201ENST00000364117 82 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.445-201ENST00000384168 102 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-950P-201ENST00000384651 107 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 MIR513A1-201ENST00000385138 129 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 RN7SKP200-201ENST00000410564 320 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC015922.2-201ENST00000435593 184 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AL137792.2-201ENST00000443484 235 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC091021.1-201ENST00000468051 388 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 RNA5SP458-201ENST00000516188 119 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 SNORA40.14-201ENST00000516543 86 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AL021879.1-201ENST00000611756 288 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC021506.2-201ENST00000612354 169 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AL078604.3-201ENST00000615580 211 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AL121890.5-201ENST00000620848 304 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 AC127459.3-201ENST00000624328 466 ntBASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC71LQ8N9Z2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 MTND4P29-201ENST00000503122 1372 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1175P-201ENST00000365200 107 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 SNORD42.2-201ENST00000365570 69 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.446-201ENST00000384178 104 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.458-201ENST00000384240 102 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.460-201ENST00000384255 102 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 AL031003.1-201ENST00000404229 172 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU2-54P-201ENST00000410299 190 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 AC027119.1-201ENST00000440877 241 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU7-94P-201ENST00000459576 63 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-1278P-201ENST00000516130 107 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RNU6-966P-201ENST00000516479 104 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 RN7SKP295-201ENST00000517264 153 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 MIR3683-201ENST00000580847 82 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 AC005828.6-201ENST00000606610 232 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.772-201ENST00000606692 102 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 AC040896.1-201ENST00000613819 479 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 AL160413.1-201ENST00000622780 310 ntBASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
CCDC71LQ8N9Z2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.112-201ENST00000363250 102 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.230-201ENST00000364348 109 ntBASIC1.11□□□□□ -2.23
CCDC71LQ8N9Z2 Y_RNA.394-201ENST00000383942 103 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms