Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 RNU7-172P-201ENST00000517125 64 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 MIR4287-201ENST00000579398 78 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 MIR5002-201ENST00000584713 97 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 DEFB117-201ENST00000602356 141 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 AL353997.5-201ENST00000618886 171 ntBASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.19□□□□□ -2.06
CCDC33Q8N5R6 RNU6-1309P-201ENST00000363305 108 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.133-201ENST00000363428 110 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 RNU6-290P-201ENST00000365212 101 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.541-201ENST00000384640 113 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 RNA5SP323-201ENST00000391094 133 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AC010154.1-201ENST00000425857 269 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 POLR2KP2-201ENST00000438155 177 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AC010409.1-201ENST00000487382 476 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AL163195.1-201ENST00000496941 348 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 RNU6-548P-201ENST00000517083 115 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.18□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.136-201ENST00000363444 102 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.176-201ENST00000363815 109 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 RNU6-713P-201ENST00000384761 107 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 RNU6-1278P-201ENST00000516130 107 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AC008269.2-201ENST00000561915 1105 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AC005034.5-201ENST00000604219 466 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AC010900.2-201ENST00000604508 210 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.783-201ENST00000613546 102 ntBASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
CCDC33Q8N5R6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 AL359851.1-201ENST00000569460 4997 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.84-201ENST00000363011 104 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.418-201ENST00000384029 102 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.512-201ENST00000384518 102 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 MIR520A-201ENST00000384862 85 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 RNA5SP212-201ENST00000391223 107 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 RNU6-710P-201ENST00000410424 105 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 AL139156.1-201ENST00000412785 841 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 AC244636.1-201ENST00000421152 228 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 HMGN2P23-201ENST00000456759 269 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 MTCO2P24-201ENST00000515611 426 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 RNU6-1337P-201ENST00000516525 95 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 AC022254.1-201ENST00000567857 235 ntBASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.16□□□□□ -2.06
CCDC33Q8N5R6 Y_RNA.149-201ENST00000363558 117 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP138-201ENST00000365098 114 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 RNU4-52P-201ENST00000384209 138 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 RPS27P1-201ENST00000450552 247 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 HMGN1P10-201ENST00000474557 553 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 MRPS17P9-201ENST00000511924 393 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 MIR3145-201ENST00000580727 82 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 AL096840.1-201ENST00000603287 93 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 AC073413.2-201ENST00000604332 360 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 MIR8062-201ENST00000621515 85 ntBASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.47-201ENST00000362697 108 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 RNU6-238P-201ENST00000363313 106 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 Y_RNA.569-201ENST00000384749 103 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 RNU6-1203P-201ENST00000410703 110 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AC024067.1-201ENST00000426199 223 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 MTCYBP9-201ENST00000431021 303 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AC025033.1-201ENST00000463883 194 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 RNA5SP437-201ENST00000517249 129 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 MIR4299-201ENST00000577899 72 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AC022217.4-201ENST00000604389 163 ntBASIC2.14□□□□□ -2.07
CCDC33Q8N5R6 AC018630.2-201ENST00000534866 2403 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RNU4-80P-201ENST00000363200 141 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RNU11-5P-201ENST00000391216 129 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 AL021397.1-201ENST00000451806 248 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RNU7-94P-201ENST00000459576 63 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RPL36AP21-201ENST00000490372 323 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RPL23AP63-201ENST00000498752 471 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RNU6-295P-201ENST00000516901 104 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 SNORA31.17-201ENST00000516953 127 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 AL161670.1-201ENST00000554348 137 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 RPL21P9-201ENST00000556149 474 ntBASIC2.13□□□□□ -2.07
CCDC33Q8N5R6 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms