Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 RNU6-221P-201ENST00000459541 99 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 SNORD116-25-201ENST00000516517 92 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 RNU6-453P-201ENST00000516819 85 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 Y_RNA.802-201ENST00000614892 130 ntBASIC2.53□□□□□ -2
SLC44A3Q8N4M1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
SLC44A3Q8N4M1 SNORA27.1-201ENST00000362604 124 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-975P-201ENST00000384296 105 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 MIR616-201ENST00000385293 97 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 MIR1294-201ENST00000408503 142 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 Z82209.1-201ENST00000422141 2135 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 AL162725.1-201ENST00000435405 301 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 HSPE1P13-201ENST00000451143 297 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 RNU7-14P-201ENST00000459331 62 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 RNU7-57P-201ENST00000459540 60 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.797-201ENST00000515977 94 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 MIR4431-201ENST00000579990 94 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 MIR5688-201ENST00000580619 83 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 AL391903.3-201ENST00000612158 163 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.778-201ENST00000620203 90 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 snoZ196.1-201ENST00000625269 89 ntBASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.52□□□□□ -2.01
SLC44A3Q8N4M1 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.24-201ENST00000362508 103 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 RNA5SP456-201ENST00000364002 114 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.215-201ENST00000364204 112 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.293-201ENST00000364908 93 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 SNORD31B-201ENST00000364977 69 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 SNORD116-13-201ENST00000384408 92 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 MIR569-201ENST00000385228 96 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 RNA5SP247-201ENST00000411181 105 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 CR769767.1-201ENST00000436337 346 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 RPS26P55-201ENST00000471178 356 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-1337P-201ENST00000516525 95 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 AC109810.1-201ENST00000534066 224 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 AC009487.4-201ENST00000624969 3585 ntBASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
SLC44A3Q8N4M1 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-1205P-201ENST00000363625 106 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RNA5SP99-201ENST00000364020 114 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 U8.7-201ENST00000364940 136 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.357-201ENST00000365487 109 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-969P-201ENST00000383900 105 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.488-201ENST00000384403 102 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 AC016909.1-201ENST00000415916 166 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RPS12P2-201ENST00000439728 269 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 SNORD65B-201ENST00000459126 73 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 RNU7-115P-201ENST00000516433 55 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 MIR548AY-201ENST00000617669 107 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.5□□□□□ -2.01
SLC44A3Q8N4M1 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.229-201ENST00000364347 113 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.586-201ENST00000391146 98 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 U6atac.2-201ENST00000408644 118 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC016717.1-201ENST00000448918 286 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RPL36AP21-201ENST00000490372 323 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC026436.1-201ENST00000510537 270 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-426P-201ENST00000516464 97 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-548P-201ENST00000517083 115 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-586P-201ENST00000517265 104 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 MIR4753-201ENST00000585119 83 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AP003357.1-201ENST00000604497 148 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC103810.6-201ENST00000606708 136 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 AC010297.1-201ENST00000623948 149 ntBASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.49□□□□□ -2.01
SLC44A3Q8N4M1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 SNORA68.1-201ENST00000364537 132 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.343-201ENST00000365354 112 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-144P-201ENST00000383951 107 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 SNORD14D-201ENST00000384390 87 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 Y_RNA.497-201ENST00000384447 98 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 RNU6-959P-201ENST00000384671 107 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 MIR95-201ENST00000385072 81 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 MIR1278-201ENST00000408753 81 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 AC245047.8-201ENST00000456455 284 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 AC114982.1-201ENST00000469402 321 ntBASIC2.48□□□□□ -2.01
SLC44A3Q8N4M1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms