Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 RNU6-1041P-201ENST00000516254 102 ntBASIC2.1□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.84-201ENST00000363011 104 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNU6-238P-201ENST00000363313 106 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNU6-290P-201ENST00000365212 101 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNU6-472P-201ENST00000384299 107 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 MIR597-201ENST00000384968 97 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.602-201ENST00000410535 92 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNU6-1203P-201ENST00000410703 110 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RNA5SP450-201ENST00000411206 102 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS52Q8N1B4 AC099677.2-201ENST00000436385 175 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 RPL23AP3-201ENST00000453844 468 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 Y_RNA.676-201ENST00000516393 96 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 MIR5089-201ENST00000580047 84 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 SNRPGP19-201ENST00000603826 189 ntBASIC2.09□□□□□ -2.07
VPS52Q8N1B4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.09□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 RNU6-271P-201ENST00000363858 105 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.376-201ENST00000365638 108 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.541-201ENST00000384640 113 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 MIR676-201ENST00000390702 67 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 CST2P1-201ENST00000425770 87 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS52Q8N1B4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS52Q8N1B4 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS52Q8N1B4 uc_338.20-201ENST00000621563 178 ntBASIC2.08□□□□□ -2.08
VPS52Q8N1B4 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS52Q8N1B4 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 RNU1-96P-201ENST00000364163 162 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 MIR515-2-201ENST00000384883 83 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 MIR515-1-201ENST00000384884 83 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 MIR1253-201ENST00000408273 105 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 AL158823.1-201ENST00000418441 478 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 AC096920.1-201ENST00000423991 241 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 MRPS10P1-201ENST00000448483 130 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 SNORA70.12-201ENST00000516084 153 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 AL137100.2-201ENST00000555786 315 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 U6.73-201ENST00000619194 103 ntBASIC2.07□□□□□ -2.08
VPS52Q8N1B4 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.07□□□□□ -2.08
VPS52Q8N1B4 WWP1P1-201ENST00000466609 2769 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.06□□□□□ -2.08
VPS52Q8N1B4 RNU6-862P-201ENST00000362804 105 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.124-201ENST00000363339 93 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.329-201ENST00000365209 107 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.383-201ENST00000383855 97 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.556-201ENST00000384677 113 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 RNU6-417P-201ENST00000384712 107 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 MT-TW-201ENST00000387382 68 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 HSPE1P13-201ENST00000451143 297 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 RPS26P55-201ENST00000471178 356 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 TRBVB-201ENST00000477100 408 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 RN7SL274P-201ENST00000492268 272 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 RNU7-128P-201ENST00000517247 62 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 AP005660.1-201ENST00000522972 293 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS52Q8N1B4 AP001282.2-201ENST00000616149 309 ntBASIC2.06□□□□□ -2.08
VPS52Q8N1B4 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.144-201ENST00000363521 113 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.396-201ENST00000383949 103 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.418-201ENST00000384029 102 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.461-201ENST00000384263 103 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 RNU6-463P-201ENST00000384340 107 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 MIR1302-3-201ENST00000408128 138 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 POLR2KP2-201ENST00000438155 177 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 AC003989.2-201ENST00000440224 169 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 RNA5SP20-201ENST00000515976 84 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 RNU6-570P-201ENST00000517051 105 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 AC024995.1-201ENST00000523014 93 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.05□□□□□ -2.08
VPS52Q8N1B4 MIR4438-201ENST00000585271 93 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 U6.108-201ENST00000637764 58 ntBASIC2.05□□□□□ -2.08
VPS52Q8N1B4 RNU1-22P-201ENST00000363334 158 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-324P-201ENST00000363957 106 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-117P-201ENST00000365415 107 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-326P-201ENST00000365480 107 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-196P-201ENST00000384315 107 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.483-201ENST00000384380 101 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-505P-201ENST00000384427 107 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 SUMO2P12-201ENST00000405924 140 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 MIR1302-6-201ENST00000408466 90 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNA5SP501-201ENST00000410990 112 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AC097462.1-201ENST00000514125 324 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 Y_RNA.668-201ENST00000516233 93 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 RNU6-1338P-201ENST00000516328 91 ntBASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.04□□□□□ -2.08
VPS52Q8N1B4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms