Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 MIR96-201ENST00000362288 78 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.88-201ENST00000363029 99 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 RNU4-41P-201ENST00000364426 143 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.358-201ENST00000365491 99 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.482-201ENST00000384377 111 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.498-201ENST00000384460 102 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 RNU6-700P-201ENST00000391043 107 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 AC002429.1-201ENST00000437672 148 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.708-201ENST00000516950 96 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 AP002004.2-201ENST00000531656 154 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 RPL21P9-201ENST00000556149 474 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 AC211469.2-201ENST00000605461 205 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 MIR3674-201ENST00000636576 68 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 AC073869.6-201ENST00000640656 341 ntBASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC65Q8IXS2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 MIR373-201ENST00000362273 69 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.6-201ENST00000362350 114 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNU6-1301P-201ENST00000362724 104 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNU6-601P-201ENST00000384540 107 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNA5SP482-201ENST00000391269 118 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 MIR873-201ENST00000401120 77 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 AC114482.1-201ENST00000418010 247 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 AC116353.2-201ENST00000505332 712 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 SNORA40.9-201ENST00000515895 93 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 Y_RNA.655-201ENST00000515919 96 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 SNORA31.4-201ENST00000516049 129 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 SCARNA16.2-201ENST00000516520 172 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNU2-56P-201ENST00000516826 190 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNU6-1116P-201ENST00000517269 99 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 AC022868.1-201ENST00000517767 391 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 AC060780.3-201ENST00000589464 80 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 AC127459.3-201ENST00000624328 466 ntBASIC0.88□□□□□ -2.27
CCDC65Q8IXS2 RNU6-376P-201ENST00000384731 106 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 MIR562-201ENST00000384894 95 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 RNU6-625P-201ENST00000459412 107 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 RNU7-12P-201ENST00000516030 62 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 RNU6-358P-201ENST00000516564 75 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 AC055872.1-201ENST00000570978 278 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 MIR4781-201ENST00000585250 76 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 AC084782.3-201ENST00000612282 578 ntBASIC0.87□□□□□ -2.27
CCDC65Q8IXS2 HSBP1P2-201ENST00000299671 229 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 SNORD114-7-201ENST00000362520 77 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU6-969P-201ENST00000383900 105 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 SNORD12-201ENST00000391002 90 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AL451046.2-201ENST00000403074 277 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU4-14P-201ENST00000410858 122 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU2-64P-201ENST00000411315 191 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 UBE2V1P7-201ENST00000446395 340 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 SNORD124-201ENST00000459577 104 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU2-12P-201ENST00000517216 168 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AL358944.1-201ENST00000528537 144 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 PRELID3BP2-201ENST00000605362 201 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AL096861.1-201ENST00000610899 123 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AC087588.2-201ENST00000617667 426 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 AC092794.2-201ENST00000620933 563 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 MIR6866-201ENST00000638146 69 ntBASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.86□□□□□ -2.27
CCDC65Q8IXS2 RNU1-93P-201ENST00000364704 169 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 RNU6-136P-201ENST00000384663 107 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 MIR100-201ENST00000385259 80 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC006461.1-201ENST00000412637 326 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC092423.1-201ENST00000430165 186 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC104332.1-201ENST00000440471 797 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC107399.1-201ENST00000451226 265 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 RNU6-120P-201ENST00000516077 103 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 RNU6-1278P-201ENST00000516130 107 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 RNU6-947P-201ENST00000516264 106 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 RNU6-1096P-201ENST00000517089 102 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC004832.4-201ENST00000608952 331 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 AC108706.1-201ENST00000611053 297 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 MIR1244-1-201ENST00000612829 85 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 MIR1244-3-201ENST00000635744 85 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 MIR1244-2-201ENST00000636449 85 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 MIR1244-4-202ENST00000636813 85 ntBASIC0.85□□□□□ -2.27
CCDC65Q8IXS2 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 RNU6-833P-201ENST00000363486 107 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 RNU6-961P-201ENST00000363893 105 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 SNORD115-30-201ENST00000364117 82 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 MIR520G-201ENST00000385064 90 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 SNORA75.4-201ENST00000391278 119 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 SNORD12B-201ENST00000410433 91 ntBASIC0.84□□□□□ -2.27
CCDC65Q8IXS2 RNA5SP511-201ENST00000410487 115 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms