Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNU4-62P-201ENST00000410125 130 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 RNU2-20P-201ENST00000410425 191 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 RNU6-121P-201ENST00000410525 99 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AL356379.1-201ENST00000414105 126 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AC009310.1-201ENST00000414414 451 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AP1B1P2-201ENST00000416196 106 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AC084364.2-201ENST00000546924 395 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AC055872.1-201ENST00000570978 278 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.06□□□□□ -2.08
HERC6Q8IVU3 AC084768.2-201ENST00000622736 221 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 WWP1P1-201ENST00000466609 2769 ntBASIC2.06□□□□□ -2.08
HERC6Q8IVU3 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
HERC6Q8IVU3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RNU6-770P-201ENST00000363929 105 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RNA5SP100-201ENST00000410903 110 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RNA5SP59-201ENST00000410922 110 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RPS27P22-201ENST00000478056 241 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AC098869.1-201ENST00000481627 292 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RPL36AP21-201ENST00000490372 323 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 TRMT112P2-201ENST00000512910 132 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RNU6-635P-201ENST00000516651 102 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 RNA5SP481-201ENST00000516814 122 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AP002001.1-203ENST00000534002 267 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AC136932.1-201ENST00000574771 208 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.05□□□□□ -2.08
HERC6Q8IVU3 MIR4713-201ENST00000582691 75 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 AC091932.3-201ENST00000624223 323 ntBASIC2.05□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.47-201ENST00000362697 108 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.64-201ENST00000362845 102 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 RNU6-238P-201ENST00000363313 106 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.143-201ENST00000363520 106 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 RNU6-20P-201ENST00000384106 107 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 MIR9-3-201ENST00000385084 90 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 RNU5A-5P-201ENST00000411054 116 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 DYNLT3P2-201ENST00000442517 295 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 SNORA70.12-201ENST00000516084 153 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC2.04□□□□□ -2.08
HERC6Q8IVU3 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.04□□□□□ -2.08
HERC6Q8IVU3 MIR4438-201ENST00000585271 93 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 AC010900.2-201ENST00000604508 210 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 MIR8081-201ENST00000611533 95 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 U6.73-201ENST00000619194 103 ntBASIC2.04□□□□□ -2.08
HERC6Q8IVU3 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.04□□□□□ -2.08
HERC6Q8IVU3 RNU6-112P-201ENST00000363599 104 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.183-201ENST00000363882 113 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 SNORA20B-201ENST00000384220 132 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RNU6-574P-201ENST00000384265 107 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 Y_RNA.574-201ENST00000384766 95 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RNA5SP467-201ENST00000391274 118 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 FTH1P12-201ENST00000432137 551 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 LINC01399-202ENST00000458450 244 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RNU7-94P-201ENST00000459576 63 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 MTCO2P24-201ENST00000515611 426 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RNU7-99P-201ENST00000516271 62 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RNA5SP364-201ENST00000516938 78 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 AC027419.1-201ENST00000522976 328 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 RPL21P9-201ENST00000556149 474 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 PRR13P7-201ENST00000605538 430 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 uc_338.20-201ENST00000621563 178 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.03□□□□□ -2.08
HERC6Q8IVU3 U6.115-201ENST00000636045 103 ntBASIC2.03□□□□□ -2.08
HERC6Q8IVU3 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.03□□□□□ -2.08
HERC6Q8IVU3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
HERC6Q8IVU3 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
HERC6Q8IVU3 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.19-201ENST00000362462 99 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 SNORD114-7-201ENST00000362520 77 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.462-201ENST00000384268 102 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 RNU6-937P-201ENST00000384325 106 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 RNU6-950P-201ENST00000384651 107 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 HMGN2P19-201ENST00000425149 265 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 MTCYBP9-201ENST00000431021 303 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 MRPS10P1-201ENST00000448483 130 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 RNY3P15-201ENST00000516297 97 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 RNU6-966P-201ENST00000516479 104 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 RNU6-250P-201ENST00000516958 103 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 SNORA44.1-201ENST00000517031 108 ntBASIC2.02□□□□□ -2.09
HERC6Q8IVU3 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.152-201ENST00000363578 100 ntBASIC2.01□□□□□ -2.09
HERC6Q8IVU3 Y_RNA.243-201ENST00000364481 109 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms